Gene Avi_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0912 
Symbol 
ID7387712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp770854 
End bp771735 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID643650440 
Productmetallo-beta-lactamase superfamily protein 
Protein accessionYP_002548648 
Protein GI222147691 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA ATCATGCCAT GCCCCCGGAG ACCCACAGGT TCCAGCTCGG CGGGTTTGAA 
GTCGTGGTCA TCAAGGACGG CACGCGGGTT TCCGAAAAGC CGGGCGAGAC CTTTGGCACC
AACCAGAGCC CGGAAACGGT TTCAGCGCTG CTGGAAAAGA ATTTCCTGCC GACCGACAAA
TTCGTCAACG GTTTTTCGCC GGTGCTCATC AATACCGGCT CTGATGTCAT CCTGTTCGAT
ACCGGCATGG GCGAACAGGG CCGCGCCAAT GGTATGGGCA GGCTCAGTGA AGGCATGATG
GCCGCAGGCT ATTCGCCCGA AGATGTCACC ATCGTCGTCC TCACCCATAT GCATGGCGAC
CATATCGGTG GGTTAATGGA AAAGGGCAAA CCGGCCTTTG CCAAGGCCCG CTATATCGCC
GGGCAGCGCG AATATGATTT CTGGACCAAT GCCGCCCGGG CTGGAACACC AGCAGAAGGC
GCGCAAAAAG CGGTTCTGGC CAATGTGAAG CCGCTGGCTG AAAAAATTAC CTTCCTCGGC
GATCAAGGTG GCGATGTGGT CTCCGGCATT CGCGGCGAGG CGGCTTTCGG CCACTCTCCC
GGCCATATGA TTTTCCATGT CGAATCCAAG GGCAAGCGCC TGCTGCTGAC CGCAGACACC
GCCAACCATT TCGTGCTGTC GCTGCAACGT CCCGATTGGG AAGTGAAATT CGACATGGAC
AAGGCTCAGG CCGCCGCCAC TCGCAAACGG GTGTTCGACA TGGCAGCAAC CGACAAGGTC
GCCTTCCTGG GCTATCACAT GCCCTTCCCC TCGGTCGGCT ATGTGGAAAC GCTCGATACC
GGCTACCGAT TCGTGCCGAA GAGCTACCAG TTCGATCTTT GA
 
Protein sequence
MDINHAMPPE THRFQLGGFE VVVIKDGTRV SEKPGETFGT NQSPETVSAL LEKNFLPTDK 
FVNGFSPVLI NTGSDVILFD TGMGEQGRAN GMGRLSEGMM AAGYSPEDVT IVVLTHMHGD
HIGGLMEKGK PAFAKARYIA GQREYDFWTN AARAGTPAEG AQKAVLANVK PLAEKITFLG
DQGGDVVSGI RGEAAFGHSP GHMIFHVESK GKRLLLTADT ANHFVLSLQR PDWEVKFDMD
KAQAAATRKR VFDMAATDKV AFLGYHMPFP SVGYVETLDT GYRFVPKSYQ FDL