Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0912 |
Symbol | |
ID | 7387712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 770854 |
End bp | 771735 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650440 |
Product | metallo-beta-lactamase superfamily protein |
Protein accession | YP_002548648 |
Protein GI | 222147691 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCA ATCATGCCAT GCCCCCGGAG ACCCACAGGT TCCAGCTCGG CGGGTTTGAA GTCGTGGTCA TCAAGGACGG CACGCGGGTT TCCGAAAAGC CGGGCGAGAC CTTTGGCACC AACCAGAGCC CGGAAACGGT TTCAGCGCTG CTGGAAAAGA ATTTCCTGCC GACCGACAAA TTCGTCAACG GTTTTTCGCC GGTGCTCATC AATACCGGCT CTGATGTCAT CCTGTTCGAT ACCGGCATGG GCGAACAGGG CCGCGCCAAT GGTATGGGCA GGCTCAGTGA AGGCATGATG GCCGCAGGCT ATTCGCCCGA AGATGTCACC ATCGTCGTCC TCACCCATAT GCATGGCGAC CATATCGGTG GGTTAATGGA AAAGGGCAAA CCGGCCTTTG CCAAGGCCCG CTATATCGCC GGGCAGCGCG AATATGATTT CTGGACCAAT GCCGCCCGGG CTGGAACACC AGCAGAAGGC GCGCAAAAAG CGGTTCTGGC CAATGTGAAG CCGCTGGCTG AAAAAATTAC CTTCCTCGGC GATCAAGGTG GCGATGTGGT CTCCGGCATT CGCGGCGAGG CGGCTTTCGG CCACTCTCCC GGCCATATGA TTTTCCATGT CGAATCCAAG GGCAAGCGCC TGCTGCTGAC CGCAGACACC GCCAACCATT TCGTGCTGTC GCTGCAACGT CCCGATTGGG AAGTGAAATT CGACATGGAC AAGGCTCAGG CCGCCGCCAC TCGCAAACGG GTGTTCGACA TGGCAGCAAC CGACAAGGTC GCCTTCCTGG GCTATCACAT GCCCTTCCCC TCGGTCGGCT ATGTGGAAAC GCTCGATACC GGCTACCGAT TCGTGCCGAA GAGCTACCAG TTCGATCTTT GA
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Protein sequence | MDINHAMPPE THRFQLGGFE VVVIKDGTRV SEKPGETFGT NQSPETVSAL LEKNFLPTDK FVNGFSPVLI NTGSDVILFD TGMGEQGRAN GMGRLSEGMM AAGYSPEDVT IVVLTHMHGD HIGGLMEKGK PAFAKARYIA GQREYDFWTN AARAGTPAEG AQKAVLANVK PLAEKITFLG DQGGDVVSGI RGEAAFGHSP GHMIFHVESK GKRLLLTADT ANHFVLSLQR PDWEVKFDMD KAQAAATRKR VFDMAATDKV AFLGYHMPFP SVGYVETLDT GYRFVPKSYQ FDL
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