Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0904 |
Symbol | kefB |
ID | 7387707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 764570 |
End bp | 766396 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650435 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | YP_002548643 |
Protein GI | 222147686 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACCG CACCCACCCT GTTGTTTACC GAGGCTCTCG TACTTTTGGG CGGCGCCGTG GTCGCGGCAC CGATTTTCCG CAAGCTCGGC CTTGGCACGG TGCTCGGCTA TTTGGCGGCA GGTGCCGTCA TCGGTCCTGT CGCCCATGTC ATCACCGGGG CGGAGGAAAT CCTCTCGGTT GCCGAGCTGG GCATCGTCTT TCTGCTGTTC GTCATCGGGC TGGAGCTGAA ACCATCGACC CTGTGGAAAA TGCGCGCCGA TATTTTCGGT CTCGGCACAG CTCAGGTAGT GTTGGGCGGT GCATTGTTGA CAGGGGTGGC GCTGGCCTTT GACCTTCTTG ACTGGCGTGG TGCGGTGATT GCAGGTTTTG GCCTGTCGCT CTCTTCCACG GCGTTTGCCT TGCAGATCCT CAATGATCGC AGCGATTTGA ACAGCCAATA TGGCCAGCGC ACCTTTTCTG TCCTGCTGTT TCAGGATCTG GCGATCGTGC CGTTGCTGGC GTTGATTTCC ATTCTCGGCG CTCAGGCGGC GCCTGCGCCC GGCTCACTGT GGATCGATAT CGGTGTGGCC GTCACGGCGA CGCTGGCGAT GATCCTGGCA GGGCGCTACC TGCTCAATCC GCTGTTTCAG GTGATGGCCC GCACCGGCGC TCGTGAGGTG ATGATTGCCG CGGCTCTGTT CATCGTACTC GGATCGGCGA TGCTGATGCA GGCGGTCGGC CTGTCCATGG CCATGGGGGC CTTTCTGGCT GGCGTTATGC TGGCCGAATC CTCCTATCGT CATGAGTTGG AAGCCGATAT CGAGCCATTT CGCGGCATTC TCCAAGCTTT GTTTTTTATG GCGGTGGGCC TGTCCGTGCA ATTTGACGTG ATTTTTGCCA ATCTCTGGCT GTTGGCCGTG GCCGTGCCGG TGGTGATGCT GATCAAGGCG TTGAGCATCT ATGGCCTGTG CCGGTTGGCA GGCTCCCGCC ATGATGACGC CATTCGTATT GCCGCCATCC TGCCGCAGGG TGGTGAATTC GGTTTCGTGC TGTTTACCAC CGCCGTTTCT GCGGGCGTGT TTTCCAGTGC GACGTCCTCG CTGCTGATTT CCATCGTCAC ACTTACCATG GCGCTGACGC CGGTGGTCGC GGCGCTCTCC TCACGGCTGT TGTCGCGCGA CCAGCACGAG GAACTGGACG AGGATTTCGA TGGTGCCGGT TCGGATGTGT TGATGATCGG CTTTTCGCGT TTTGGCCAGA TCGCCGCCCA GGTCTTGCTG GCCAGTGGCC GGGACGTGAC GATCATCGAC GATTCCGCCG ACCGTATTCG CCAGGCCGCC TCCTTCGGGT TTCGCATTTA TTTCGGGGAT GGCACGCGGC TGGACATGTT GAGGGCCGCT GGCATCGAAA AGGCCAAGGT GGTCGCGGTC TGTACGCAGA AGCGGGAGGT TACCGACCGG ATCGTCGAAC TGGTCGCCTC CGAATTTCCC CAGGCGCGGC TGTTCGTGCG CTCCTATGAT CGTGTTCACA GCCTGTGGTT GCGGGCGCGC AATGTCGAAT ATGAACTGCG CGAAACGGTG GAATCAGGCT TGAAATTTGG CCGCAAGACC ATCGAGGCCC TGGGTGTGGA TGAGGACATG GCCGAGGCCA TCGAGGCCGA TATCCGCCGC CGCGACGATG AGCGTCTGCG CATTCAGGCG GTGGAAGGCA TCAAGGGCGG CGCCCATATG CTGTATAACA GGCCTGTCCA GCCGGAACCG CTGATCAAAC CCAAGCGGGG ACATGAGACG GAGAAAGATC AGGACAAAGA CAAAGAGAGG GAAAAAGACC GGGATACGGC TGCTTAG
|
Protein sequence | MSTAPTLLFT EALVLLGGAV VAAPIFRKLG LGTVLGYLAA GAVIGPVAHV ITGAEEILSV AELGIVFLLF VIGLELKPST LWKMRADIFG LGTAQVVLGG ALLTGVALAF DLLDWRGAVI AGFGLSLSST AFALQILNDR SDLNSQYGQR TFSVLLFQDL AIVPLLALIS ILGAQAAPAP GSLWIDIGVA VTATLAMILA GRYLLNPLFQ VMARTGAREV MIAAALFIVL GSAMLMQAVG LSMAMGAFLA GVMLAESSYR HELEADIEPF RGILQALFFM AVGLSVQFDV IFANLWLLAV AVPVVMLIKA LSIYGLCRLA GSRHDDAIRI AAILPQGGEF GFVLFTTAVS AGVFSSATSS LLISIVTLTM ALTPVVAALS SRLLSRDQHE ELDEDFDGAG SDVLMIGFSR FGQIAAQVLL ASGRDVTIID DSADRIRQAA SFGFRIYFGD GTRLDMLRAA GIEKAKVVAV CTQKREVTDR IVELVASEFP QARLFVRSYD RVHSLWLRAR NVEYELRETV ESGLKFGRKT IEALGVDEDM AEAIEADIRR RDDERLRIQA VEGIKGGAHM LYNRPVQPEP LIKPKRGHET EKDQDKDKER EKDRDTAA
|
| |