| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0903 |
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| Symbol | |
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| ID | 7387706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 763012 |
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| End bp | 764358 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650434 |
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| Product | PmbA/TldD related protein |
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| Protein accession | YP_002548642 |
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| Protein GI | 222147685 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTG AAAATTCCCC CGAACATCTT TTGTCGCGCG CCCATCAACT GGTCGATCTG
GCCCGCAAAG CCGGGGCCGA ACGGGCCGAT GCCGTCGTGG TGCGCTCCCG CGCCCATTCG
GTCAGTGTGC GCCTCGGCAA GGTCGAGCAG ACCGAATCCT CGGAAAGCGA CGATTTTTCG
CTGCGGGTGT TTATCGGCAA CCGCGTCGCC TCCGTCTCGG CCAATCCGGG CTTCGACCTG
ACGGCGCTGG CCGAACGCGC CGTTGCCATG GCGAGGGTTT CGCCGGAAGA CCCCTATACC
GGCCTTGCCG ATGAAGAGGA TCTGGCCCAG ACCTATCCGG ATCTGCAACT TTACGATCCA
ACCGAAGTGT CGAGCGATGC GCTGCGCGAC GCAGCTCTTG CCATGGAAGA GGCAGCTCTT
GCCGTCAATG GCGTCAGCAA TTCGCTGGGG GCCAGCGCAT CAGCAGGCAT GGGCGGCTTG
GTCCTCGTCA CCTCGCACGG CTTTTCAGGC CACTACCAGG CCTCGCGGTT TTCCCGCTCG
ACCGGGGTGA TCGCTGGCGA AGGCACGTCG ATGGAGCGCG ACCACGATTA TGACAGCCGC
CTCTATTTCG CTGAACTGGA CAGTCCTGAA GAGATCGGCA GGCGCGCAGG CGAGCGCACG
GTGCGCCGGA TCAATCCGCG CAAGGCCGAC ACCGCCAAAA ACCTGACGGT TGTGCTCGAT
CCGCGCGTCG CACGCGGCTT TGTCGGCCAT ATCGCCGGTG CTATCAATGG CGCTGCCGTG
GCCCGTAAAA CCTCCTTCCT GCGCGACCGC ATGGGCCAGC AGGTGCTGAA ATCCGGTCTC
AGCATCACCG ACGATCCGAC CCGGGTGCGT GGTTCGTCCT CGCGTCCCTT CGATGGCGAA
GGCGTGATGG GCAAGCCCCT GACGATGATC GAGGATGGTG TTTTGCGCCA TTGGTTCCTA
TCGACCTCGG CGGCGCGCGA ACTGGGCTTG AAAACCAATG GACGCGGCGC GCGCGGCGGC
ACGTCCGTCT CGCCCTCCTC CTCCAATCTG GCGCTGGAGC CTGGCGATAT CACGCCGGAG
GCGCTGATTT CAGGGATTTC CAGTGGATTT TACATTACCG ACATGATCGG CCATGGGGTT
GACATGATCA CCGGCGATTA CAGCCGGGGG GCCTCCGGTT TCTGGATCGA GAATGGCGAA
CTGACCTATC CGGTTTCGGA AGTGACGATT GCGTCCAACC TGAAGCAGAT GTTCATGGCG
ATGACGCCAG CCAATGACAT CGACCGCAAA TTCGGCGTCG CAGCTCCTAC ACTTGCCATC
GAAGGCCTGA CGATTGCAGG GAAATAA
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| Protein sequence | MSSENSPEHL LSRAHQLVDL ARKAGAERAD AVVVRSRAHS VSVRLGKVEQ TESSESDDFS
LRVFIGNRVA SVSANPGFDL TALAERAVAM ARVSPEDPYT GLADEEDLAQ TYPDLQLYDP
TEVSSDALRD AALAMEEAAL AVNGVSNSLG ASASAGMGGL VLVTSHGFSG HYQASRFSRS
TGVIAGEGTS MERDHDYDSR LYFAELDSPE EIGRRAGERT VRRINPRKAD TAKNLTVVLD
PRVARGFVGH IAGAINGAAV ARKTSFLRDR MGQQVLKSGL SITDDPTRVR GSSSRPFDGE
GVMGKPLTMI EDGVLRHWFL STSAARELGL KTNGRGARGG TSVSPSSSNL ALEPGDITPE
ALISGISSGF YITDMIGHGV DMITGDYSRG ASGFWIENGE LTYPVSEVTI ASNLKQMFMA
MTPANDIDRK FGVAAPTLAI EGLTIAGK
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