| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0897 |
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| Symbol | lpxK |
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| ID | 7387701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 758535 |
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| End bp | 759572 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650429 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_002548637 |
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| Protein GI | 222147680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.34998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC ATGCACCCTC CTTTTGGTGG CAAAAAGCCA GCTTTCCTGC CCTGGCGCTG
TGGCCACTGT CTTTCCTCTA TGGCCGAATT GCCGCCCGGC GCATGCGCGG GTCTTCAGCC
TATGCTCCCG CGGTACCGGT GATCTGTATC GGCAATGTCA CGCTTGGCGG CGCTGGCAAG
ACGCCGACGG CCCTGGCTCT GGCCAAGGCC GCCCTTGCCA TGGGCCTGAA GCCCGGCTTT
CTCAGCCGTG GCTATGGTGG AACGGTCCGC CGCCCGACCT TGGTCGATCC GGGCCACCAC
ACCGCCAAGG ATGTCGGTGA CGAGCCGCTG CTGCTGGCCT CGGTGGCACC GACAGTGGTG
GCATCGCGTC GCCGCGACGG AGCCAGGGAA CTGGAACGCC AAGGCATAGA CCTGATCATC
ATGGATGACG GATTTCAAAG CGCGCAGATC CGCATCGATT GTGCCGTGGT GGTGACCGAC
AGTTACAAAG GCGACGGCAA TGGTTTCGTC TTTCCCGCCG GGCCATTGCG GGCACCGCTG
GCAATCCAGT TTCAAAAGCT GGACATGCTG CTGGTGGTCG GCAAGGGCGA TGCCGCCATT
CCGATGGTGC GGCGGGGGGC CCGAATGGGC AAGCCGGTAT TGACCGCTCA GCTTCACCCC
CTGCCCGGCC CAAACCTTAG AGGTCAGCGG GTGCTGGCCT ATGCAGGCAT TGCCGATCCG
GAAAAATTCT ACCGCACCCT GCGCGAACTG GGTGCAGACA TCGTCGTGGC CAGAGGGTTT
GGCGATCACC AGCCCTTGTC GGCTGCGGCA ATTGCCGAGC TGATCGAAGA GGCTGAGGCC
AAAAACCTGT CGCTGGTCAC CACCGCCAAG GATCAGGCCC GGCTACGGGG TTCACGTCGG
GGTGGCGCAG GACAAGACCG GGCACAGGAA CTTCTGGCCA AATCCACCGT GATCGAGATC
GAGATGATCT TCGACGATCC GGCTGTGCCA GCACGCGTGA TAGACCAGGC GCAGGATCGT
TTTCGCAGGT CTCGGTAA
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| Protein sequence | MKLHAPSFWW QKASFPALAL WPLSFLYGRI AARRMRGSSA YAPAVPVICI GNVTLGGAGK
TPTALALAKA ALAMGLKPGF LSRGYGGTVR RPTLVDPGHH TAKDVGDEPL LLASVAPTVV
ASRRRDGARE LERQGIDLII MDDGFQSAQI RIDCAVVVTD SYKGDGNGFV FPAGPLRAPL
AIQFQKLDML LVVGKGDAAI PMVRRGARMG KPVLTAQLHP LPGPNLRGQR VLAYAGIADP
EKFYRTLREL GADIVVARGF GDHQPLSAAA IAELIEEAEA KNLSLVTTAK DQARLRGSRR
GGAGQDRAQE LLAKSTVIEI EMIFDDPAVP ARVIDQAQDR FRRSR
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