Gene Avi_0895 details

Gene Information

• Locus tag: Avi_0895
• Symbol: mutL
• ID: 7387699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 756317
• End bp: 758170
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643650427
• Product: DNA mismatch repair protein
• Protein accession: YP_002548635
• Protein GI: 222147678
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0323] DNA mismatch repair enzyme (predicted ATPase)
• TIGRFAM ID: [TIGR00585] DNA mismatch repair protein MutL

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.380086
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA AACAGCTTTC GGAAACCTTG ATCAACCAGA TCGCCGCTGG CGAAGTGATT 
GAGCGCCCGG CCAGTGCCGC CAAGGAATTG ATCGAAAACG CTATCGATGC CGGGGCAAGC 
CGCATCGAGA TCGCCACGGC GGGTGGCGGC AAGGCCCTGC TGCGCATCAC CGACAATGGG 
TGCGGCATGG ATGGGCAGGA CCTGGCGCTG GCGGTTCGCC GTCATTGCAC CTCCAAGCTC 
AATGAGTCGT TGATGGACAT CAAGAGCCTT GGCTTTCGCG GTGAGGCGCT GCCCTCGATC 
GGCTCGGTGG CGCGCCTGAC CATTGCCAGC CGCAGAGCAG ACAGTGCCAG CGCTTTCCAG 
ATCGCGGTGG AAGGCGGCAA GGTTGGAGAG GTGCGCCCGG CACCTGGAAA TCCTGGCACG 
GTGGTCGAGG TGCGCGATCT GTTTTTTGCC ACGCCAGCCC GGCTGAAATT CCTGAAAACC 
GAAAGAGCCG AGGCCGCCGC GATTACCGAA ATGGTCAAGC GCATGGCCAT CGCCTTTCCG 
AAGATCCGCT TCGTGCTGTC CGGCTCTGAC CGCTCGACCC TTGAACTGCC AGCGACCGGC 
GACGATCATC TCGCCCGAAT TGCCCAGGTG CTCGGCCCCG ATTTTCGGGA CAATGCCATT 
GCGCTCGACG CTGAGCGCGA GGATGTGCAT CTGGGCGGCT TTGCCGGTGT GCCGACCTTC 
AACCGTGGCA ATTCCGCCCA TCAATATGCC TTCGTCAATG GCCGTCCGGT GCAGGACAAG 
CTGATCCTGT CGGCCATTCG CGGCGCCTAT GCCGAAACCG TGCCGCATGG CCGCTATCCG 
GTGGCGGTGC TGGCGCTGAC GGTCGATCCG GCTCTGGTCG ATGTCAATGT CCATCCGGCC 
AAATCGGATG TGCGGTTTCG CGATCCCGGC CTGGTGCGCG GCCTGATCGT CGGGGCGATC 
CGCCAGTCCT TGACGCGCGA AGGCGACCGG TCATCGACGG CGGGGGCCGG TGCCATGCTG 
CGGGCCTTCC GCCCTGGTGC AAATGGCGGT TTTTCCGAAG GCGCGCAGGC GGCTGCGAAC 
AATTCTTATG CGCCCGCCTA TGGCGCACGG CCGCCGCAGC CTTCAGCATG GAGCGTCGAT 
ACGTCCCCCC ATCGGCCACT TGATGATGGT CAGAACCGGT TCGATGGTCT GGCGCTGCCG 
GCGGCTCGGG CGGATGCGCA TGTCTCGCCC TCGCAGATCT CCGAGCCTGT GGCGATGGCG 
ATGGAAAGCG GTAGGTTTCG CCTCGGCGCG GCGCGGGCGC AGGTTCACGC CAATTATATC 
GTCGCCCAGA CGCAGGACGG ACTGGTGATC GTCGATCAGC ATGCCGCCCA TGAGCGTCTG 
GTGTTTGAGG ATATGCGCAA GGCGCTATCG GGTCGCAGAT TGCCCAGCCA GGGCCTGCTC 
ATTCCCGAAA TCATCGGATT GCCGGAAGAA GACTGCGACC GTCTGATGGA TCACGCCGAA 
AACCTTGACC GGCTGGGCCT TGCCATCGAG CGGTTCGGGC CGGGAGCGAT TGCGGTGCGC 
GAAACGCCTG CCATGCTGGG CGAAGTGGAT GTGCCGGGAC TTGTGCGGCA ATTGGCTGAT 
GAAATTGCCG AATGGGAAAC GGCGGGCAGC CTGTTTGCCC GGCTGGAACA TGTGGCCGCC 
ACCATGGCCT GCCACGGATC GGTGCGCTCT GGCCGCCTGC TGCGGGTCGA GGAAATGAAT 
GCATTGCTGC GAAAAATGGA GGAAACGCCG GGTTCCGGCC AATGCAATCA CGGGCGTCCA 
ACCTATATTG AACTGAAACT GTCGGATATC GAGCGGCTGT TCGGTCGCAG TTGA 

 

Protein sequence

MSIKQLSETL INQIAAGEVI ERPASAAKEL IENAIDAGAS RIEIATAGGG KALLRITDNG 
CGMDGQDLAL AVRRHCTSKL NESLMDIKSL GFRGEALPSI GSVARLTIAS RRADSASAFQ 
IAVEGGKVGE VRPAPGNPGT VVEVRDLFFA TPARLKFLKT ERAEAAAITE MVKRMAIAFP 
KIRFVLSGSD RSTLELPATG DDHLARIAQV LGPDFRDNAI ALDAEREDVH LGGFAGVPTF 
NRGNSAHQYA FVNGRPVQDK LILSAIRGAY AETVPHGRYP VAVLALTVDP ALVDVNVHPA 
KSDVRFRDPG LVRGLIVGAI RQSLTREGDR SSTAGAGAML RAFRPGANGG FSEGAQAAAN 
NSYAPAYGAR PPQPSAWSVD TSPHRPLDDG QNRFDGLALP AARADAHVSP SQISEPVAMA 
MESGRFRLGA ARAQVHANYI VAQTQDGLVI VDQHAAHERL VFEDMRKALS GRRLPSQGLL 
IPEIIGLPEE DCDRLMDHAE NLDRLGLAIE RFGPGAIAVR ETPAMLGEVD VPGLVRQLAD 
EIAEWETAGS LFARLEHVAA TMACHGSVRS GRLLRVEEMN ALLRKMEETP GSGQCNHGRP 
TYIELKLSDI ERLFGRS