Gene Avi_0873 details

Gene Information

• Locus tag: Avi_0873
• ID: 7387687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 741976
• End bp: 744081
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643650414
• Product: Methyl-accepting chemotaxis protein
• Protein accession: YP_002548623
• Protein GI: 222147666
• TIGRFAM ID: [TIGR01541] phage tail tape measure protein, lambda family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATG ATGAAGAACG GCTTGTGGTG CTTCTCGAGG CGCGGATTAA AGACCTTGAG 
CGCAATATGG CGAAAGCCTC CGGGACCACA GCGAAGCGCT TCCGGGAAAT GTCACTCTCT 
TCCAAATCTG CGACAAAGCA GATGGAACAG GACGCGATCC GCTCCACAAC ACGGATCAAT 
CAGGCCATGG CGACGGTCGG CACGAAGATC GGCGCGGTTG GCAAGGCTTT TGCTGGTGGA 
ATTGCCGGTG GCATCGCTGG GCTTGGGGTG GCGGGTGCGG TCACGGCAGT ACGTGAAATT 
ACGTCCAGCC TTGCCGAGAT GAACGCGGAA GCGCTCCGGG CGGGTCTCAG CACCCAGGCG 
TTCCAAGAGC TGAAATATGT CGCGGATCAA AACAAGGTCA GCGTTGACGC CCTGACGGAC 
GGCATGAAGG AATTGAGCCT GCGGGCCGAT GAATTCATCA TTACCGGCAA AGGCTCCGGG 
GCGGAGGCCT TCCAGCGCCT CGGCTATTCT GCGCAGGAGC TGAAGGAAAA AATCAAAGAT 
CCGGTCGCAC TGTTTACCGA AATCATCGGC AAGTTGGGCG AATTGGACAA TGCTGCGCAA 
ATCCGCATAT CGGACGAACT GTTCGGCGGT ACGGGCGGCG AACAGTTTGT GCAGCTCATC 
GGGCGCGGTG AACAAGGCAT CCGCGACCAG ATCAAAGCCG CGAATGATCT GGGCATCGTC 
ATTGACGATA GCGTCATCAA AAAAGCGGTT GAGGTCGATG CCAAGTTCAA CATGATCGCG 
GCCACCATCG GCGGCAACCT GAAATCGGCA GTGGTTGAAG CGTTCGAATA TCTCGTGAGT 
TTTGTTGACA GCTATCGCGA TTTCCAAAAC CAGACGGACG CGACCCTTGA ACAACGGATT 
GCCGAGCTGG GGCAAAAGCG GCTGGATCTC GAAACCAAGA TCCTAGAGAC CCAAGACCGT 
CAACGCCAGG GCATGGAAAA GCTGTCCTCC GTCGCGAAAG ACCTTGGGTT TGAGGATTCG 
AAGAATTCTA TCGTTGCAGG TGATACCGGC CAAATCGAAG AATACCGGCG ACAACTGGCG 
GCGGTGGCAG AAGAGGAACG GCAGATCGTA GAGGAACGCG CCCGCCGTCC GACGATCAGC 
ACCCCCACGC AACCGACCGG AAGTTACAGC GGCGGTCAAA CGGTTCCGTC CAGCAGCTCC 
AGTTCCAAAA AAACCAGCAG CCCCGATGAG TACCAGCGGG CGACGGAATC CCTTCGGGAA 
CACATCGCCG TCATGCAGGC CGAACAGGAA GCGCAAGCCG GGTTGAACCC TCTCATTGAC 
GACTATGGTT TTGCTGTTGA GAAGGCCGCT GCTCAACAGG ACTTGCTTAA TGCCGCCAAG 
GAAGCGGGCA TCAAGATCAC GCCAGAGCTA TCCAGCGAGG TTGATAAGCT TTCCACGGCC 
TACGCCAACT CGGTTGTGCA GGCGAAAAAA CTTGGCGATA CGCAGGACGA AATCCGCCAA 
CGGGCGGAAG AGGCAAACCA ATTCAACAAG AGTTTTACAC GCGGCATTGT TGACGGGTTC 
ATTGAGGGCA AGAATGCCGC CGATGTCTTC TCAGATGCCC TGAAAAAGAT CGGCGACCGG 
CTTCTTGATA TGGTCTTTAA TGATCTGTTC GCCTCGCCAA CCCAAGGCGG AAGCGGCGGG 
GGGATCAGCG GAATCATTAG CGGTTTCGGC AAGTTGCTGG GCTTTGACAG CGGCGGCTAT 
ACTGGGCCGG GTGGGAAGCA TGAACCGGCT GGCATCGTCC ACAAGGGGGA AGTCGTCTTC 
AGTCAAGCCG ATGTCCGCCG CTTTGGTGGT GTGGGCCGGG TGGAAGCCTT GCGGCGCGGC 
TTCGGTTACG CCGATGGCGG GCCGGTGGCC GTGACGCCTG CGCCCATGGT CAACAGATCG 
TCTGGCGGTG CCAGTACCAG CGCCACGCCA ATCCAGATCA CCTTCAGTCC AGTGATTGAT 
AATCGCGGTG CCTCGGTTGA GGCCGTAGCG CGCAACGAAC AGGCATTGGC GAAATTCCAG 
AAAACCTTGC CTGCACAGAT CATCGCCACG ATCCGGGATG CAAGAGCCAG GGGGATGAAA 
GTCTAA 

 

Protein sequence

MADDEERLVV LLEARIKDLE RNMAKASGTT AKRFREMSLS SKSATKQMEQ DAIRSTTRIN 
QAMATVGTKI GAVGKAFAGG IAGGIAGLGV AGAVTAVREI TSSLAEMNAE ALRAGLSTQA 
FQELKYVADQ NKVSVDALTD GMKELSLRAD EFIITGKGSG AEAFQRLGYS AQELKEKIKD 
PVALFTEIIG KLGELDNAAQ IRISDELFGG TGGEQFVQLI GRGEQGIRDQ IKAANDLGIV 
IDDSVIKKAV EVDAKFNMIA ATIGGNLKSA VVEAFEYLVS FVDSYRDFQN QTDATLEQRI 
AELGQKRLDL ETKILETQDR QRQGMEKLSS VAKDLGFEDS KNSIVAGDTG QIEEYRRQLA 
AVAEEERQIV EERARRPTIS TPTQPTGSYS GGQTVPSSSS SSKKTSSPDE YQRATESLRE 
HIAVMQAEQE AQAGLNPLID DYGFAVEKAA AQQDLLNAAK EAGIKITPEL SSEVDKLSTA 
YANSVVQAKK LGDTQDEIRQ RAEEANQFNK SFTRGIVDGF IEGKNAADVF SDALKKIGDR 
LLDMVFNDLF ASPTQGGSGG GISGIISGFG KLLGFDSGGY TGPGGKHEPA GIVHKGEVVF 
SQADVRRFGG VGRVEALRRG FGYADGGPVA VTPAPMVNRS SGGASTSATP IQITFSPVID 
NRGASVEAVA RNEQALAKFQ KTLPAQIIAT IRDARARGMK V