Gene Avi_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0851 
Symbolmqo 
ID7386325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp727483 
End bp729042 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content59% 
IMG OID643650397 
Productmalate:quinone oxidoreductase 
Protein accessionYP_002548606 
Protein GI222147649 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGTCC TGTTGATCGG TGGCGGCATC ATGAGTGCGA CGCTGGGTGT TTTGCTCAGC 
CAGCTTGAGC CGAACTGGAC GATTGAAATG CTTGAGCGGC TCGACGCCGT GGCCATGGAA
AGCTCCAACG GCTGGAACAA TGCCGGCACG GGGCATTCGG CCCTGGCCGA GCTGAATTAT
TCGCCGATGG ATGCGAAAGG CAATGTGCAT ATCGAAAAGG CGATTGAGAT CAATTCGGCC
TTCCAGATCA CCCGCCAGTT CCTCGCCCAT CAGGTTGATG TTGGCGTGTT GAAAAATCCG
CGCTCGTTCC TCAACTCGAC ACCGCACATG AGTTTCGTCT GGGGCGATGA GAACACGGCG
TTTCTTGCCA AGCGGTTTGA AGCGTTGAAA GCCAGCCCGC TGTTTTCCGG CATGCAGTTT
TCGACCGATC ATGACAAGAT TGCCGAATGG GTGCCGCTGA TGATGGACGG GCGTGATCGC
GCCCAGAAGC TCGCCGCCAC CTGGAGCCCC CTTGGCACCG ACGCCGATTG GGGCGAGGTG
ACCCGTCAGT ATGTCACGCA TCTGAAGAGC CATCCAAACT TTGCGCTGCG CACCTCCACC
GAAGTGCAGG CGATTGAAAA GACCAGCGAC GGATCGTGGA ACGTCAGCAC CTCCAATCGC
AAGGATGGAT CGTCGACCAC CGTCAAGGCG AAGTTCGTGT TCATCGGTGC GGGCGGTGGT
GCGTTGCACC TTCTGCAGAT GGCCGGCATT CCTGAAGGCG ATGACTACGC GGGCTTCCCC
GTGGGCGGTT CGTTCCTGGT CTGCGACAAA CCAGAGATCG CAAACCAGCA TTTTGCCAAG
GCCTACGGGC AGGCTTCCAC CGGTGCGCCG CCAATGTCGG TTCCGCATCT CGACACCCGC
GTGTTTGAAG GCAAGCGCCA CTTGTTGTTT GGCCCCTTCG CAACCTTCTC GACAAAGTTC
CTGAAGGAAG GATCGCTGTT CGATCTGCCT GCGACAATCA CGCTCGAAAA CATCTGGCCC
ATGCTGAAAG TTGGCTATGA TGAGTTTGAT CTGGTCGAAT ATCTGGCCGG GCAGCTTTTG
CTGTCAGACG CAGATCGGCT GGAGGCCCTG CGCGCCTATT TTCCCAATGC CAAGGCCGAG
GATTGGCGCC TTTGGCAGGC CGGCCAGCGC GTTCAGATCA TCAAGAGAGA CGCCAAAAAG
GGCGGCATTC TCAAGCTCGG AACAGAAATT GTGGCGGCCA AGGATGGCAG CATTGCCGCC
CTGCTCGGCG CTTCTCCGGG CGCGTCAACG GCTGCACCGA TCATGCTGGA TCTGCTCCAG
AAAGTGTTTG CCGAGAAATT GGCGACACCG GAATGGCAGG AGAAGGTGCG CACCATGGTG
CCAAGCTATG GCGTCAACCT CAATGAGAAC CCCGACATGC TGGCCAAGGA ATGGGCGGCG
ACGGCAGAGC GCCTTCAACT GACGCTCGCA CCACCAGCAA TCGACATGTC CGCAATAACA
AAGCCAGGCG TCAGCGCACC GGCGGCAGAC ATCAAACGTG TGCCGGACAT GGCGCTGTAA
 
Protein sequence
MDVLLIGGGI MSATLGVLLS QLEPNWTIEM LERLDAVAME SSNGWNNAGT GHSALAELNY 
SPMDAKGNVH IEKAIEINSA FQITRQFLAH QVDVGVLKNP RSFLNSTPHM SFVWGDENTA
FLAKRFEALK ASPLFSGMQF STDHDKIAEW VPLMMDGRDR AQKLAATWSP LGTDADWGEV
TRQYVTHLKS HPNFALRTST EVQAIEKTSD GSWNVSTSNR KDGSSTTVKA KFVFIGAGGG
ALHLLQMAGI PEGDDYAGFP VGGSFLVCDK PEIANQHFAK AYGQASTGAP PMSVPHLDTR
VFEGKRHLLF GPFATFSTKF LKEGSLFDLP ATITLENIWP MLKVGYDEFD LVEYLAGQLL
LSDADRLEAL RAYFPNAKAE DWRLWQAGQR VQIIKRDAKK GGILKLGTEI VAAKDGSIAA
LLGASPGAST AAPIMLDLLQ KVFAEKLATP EWQEKVRTMV PSYGVNLNEN PDMLAKEWAA
TAERLQLTLA PPAIDMSAIT KPGVSAPAAD IKRVPDMAL