Gene Avi_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0850 
Symbol 
ID7386324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp726307 
End bp726984 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID643650396 
Producttwo component response regulator 
Protein accessionYP_002548605 
Protein GI222147648 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.709175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAG TTATCCTTAT TGAGGATGAT GAAGATACGG CACAAGATAT CTGCGCTGAG 
CTGAAAGATT ACGGATACGC CGTTGACTGG GAATCCGATG GTGCCAGGGG CCTTGAACGC
GCAAGGAATG GCGGGGCAGA TATCCTGATC GTTGACCGTA TGCTGCCTGG TATGGATGGC
CTTGCTGTGA TTGATACATT GCGGCGCGAA CAGGTTCGCA CGCCTGTGCT TGTCATCAGT
GCCCTCAGCG CCGTCAACGA CCGTGTGCGC GGCCTGCGGG CCGGTGGCGA CGACTATCTC
ACCAAGCCCT TTGCGATCCT CGAACTTGTC GCCCGCGTGG AAGCCCTTCT TCGCCGCCCC
GCTGACATGT CGGCAAAAGT GCTGCGGGTT GGACCGCTTG AGCTTGACCT TCTGGAGCGC
AGCGCTTGCC GCGGCGAAAG AGAGATTGAG CTTCTTCCCC GTGAATTCAA GCTGCTCGAA
TATATGATGC GCCATTGCGA ACAGCTTCTG ACGCGAGGAA TGCTGTTTGA GGAAGTCTGG
AAATATAAAT TCGTTCCCGA TTCAAACCTC ATCGATGTGC ATATGGGTCG GCTCAGGCGA
AAAATTGATC ATCCGGGAGA TCACCCGATG ATCTCCAATG TTCGTGGAGA AGGTTTTGTA
CTTCGCGCGC CCGATTGA
 
Protein sequence
MAKVILIEDD EDTAQDICAE LKDYGYAVDW ESDGARGLER ARNGGADILI VDRMLPGMDG 
LAVIDTLRRE QVRTPVLVIS ALSAVNDRVR GLRAGGDDYL TKPFAILELV ARVEALLRRP
ADMSAKVLRV GPLELDLLER SACRGEREIE LLPREFKLLE YMMRHCEQLL TRGMLFEEVW
KYKFVPDSNL IDVHMGRLRR KIDHPGDHPM ISNVRGEGFV LRAPD