Gene Avi_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0846 
Symbol 
ID7386321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp723118 
End bp724242 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content58% 
IMG OID643650393 
Producthypothetical protein 
Protein accessionYP_002548602 
Protein GI222147645 
COG category[R] General function prediction only 
COG ID[COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGC ATCCTTTGCT GGCGCAGCCG GAGCGTTTTG TGACGCGCAA TGAGGTTGTC 
GAGCTGATTG GCCGGTTGAC GGACAATCTG ATCAACATCA CGGACACCAC AGGGGAATTC
CTGCTGCGGC TGGACGATGG GCGGGTGATC GATACCAAGG GCTGGGCCGG GTGGGAATGG
ACCCATGGTA TCGGGCTTTA CGGTCTGTTT AAATACTGGC AGCAGACCGG CGATGCCAAG
GCGATGACTG TTATCACCGA CTGGTTCTCG GCACGGCTTG CCGAGGGAAC CCCGACCAAG
AATATCAACA CGGTCTGCCC GTTTCTGACG CTCGCCTGCC TTTATGAACA TGCGCCCAAC
CCGGCCTTTA TCCCCTATCT GGAAACCTGG GCCGAGTGGG TGATGCATGA GATGTCGCGC
ACGCGCGAAG GCGGTTTGCA GCATATCGTC TATAACAGCG TCAACGACCA GCAGATGTGG
GACGATACGC TGATGATGAG CGTCATGCCG CTCGCCAAGA TCGGCCTGCT GTTGAACCGC
CCGGACTATT TGGAAGAGGC GAAGTATCAG TTTCTGATCC ATAGCCAATA CCTCGCCGAC
CGCGCCTCCG GCCTGTGGTT CCATGGCTGG ACCTTCGATG GCAATCATAA TTTTGCCCGC
GCACTCTGGG CCCGCGGCAA TTCCTGGGTG ACCATTGCCA TTCCGGAATT CATCGATCTC
TTGCAATTGC CGGAAGGCGA CGCGGTGCGG CGTCATCTAC TCTCTACGCT CGACCGTCAG
GCCGCAGCCC TTGCCAAATA TCAGGACCCT TCCGGCCTCT GGCACACGCT GGTCGATGAC
GAGGGCAGCT ATCTGGAAGC CTCGGCCACC GCCGGTTTTG CCTATGGGCT GATGAAGGCG
GTGCGCAAAC GGTATATCAG CGCGGACTAT CGGCCCGTGG CGGAACGCGC GGTGCGCGGC
GTCATTGCCA ATATCGACGC CAAGGGCGAA TTGAACCAGG TGTCCTTCGG CACCGCCATG
GGTTCGGATC TCGATTTCTA TCGCACTATC AAGCTGACCT CGATGCCCTA TGGGCAGGCG
ATGGCCATTC TGTGTCTTTC TGAATATCTG AGATCCTTTA TTTGA
 
Protein sequence
MTMHPLLAQP ERFVTRNEVV ELIGRLTDNL INITDTTGEF LLRLDDGRVI DTKGWAGWEW 
THGIGLYGLF KYWQQTGDAK AMTVITDWFS ARLAEGTPTK NINTVCPFLT LACLYEHAPN
PAFIPYLETW AEWVMHEMSR TREGGLQHIV YNSVNDQQMW DDTLMMSVMP LAKIGLLLNR
PDYLEEAKYQ FLIHSQYLAD RASGLWFHGW TFDGNHNFAR ALWARGNSWV TIAIPEFIDL
LQLPEGDAVR RHLLSTLDRQ AAALAKYQDP SGLWHTLVDD EGSYLEASAT AGFAYGLMKA
VRKRYISADY RPVAERAVRG VIANIDAKGE LNQVSFGTAM GSDLDFYRTI KLTSMPYGQA
MAILCLSEYL RSFI