Gene Avi_0840 details

Gene Information

• Locus tag: Avi_0840
• Symbol: gntK
• ID: 7386318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 720329
• End bp: 720874
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650390
• Product: gluconokinase
• Protein accession: YP_002548599
• Protein GI: 222147642
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3265] Gluconate kinase
• TIGRFAM ID: [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCC ATCAGACAGC CGACACCGTT GCTACCAGAC CTTGGGCGAT CATCGTCATG 
GGGGTCAGCG GCTGCGGCAA AAGCTCGATT GGCGAGGGCC TGGCGAAAAA GCTTGACGCC 
CCCTTCCTGG AAGGTGACAG CCTGCATCCC GCCGCCAATG TCGAGAAAAT GGCCAAGGGC 
ACGCCGCTGA ACGATGAAGA CCGTTGGCCC TGGTTGCAAG CGATCGGCGA TAAAATGGCC 
GCCGCCTTGC AGGAGGGCCA AACCATTATC GTGTCCTGCT CGTCGTTGAA GAAAAGCTAT 
CGCGACCTGC TGCGCGAAGC GACTGGCAAT CGCACCGCGT TCATTTATCT GGAAGGCTCG 
AAAGAGCTGC TGACCCGCCG CATGGGTGAA CGCACCGGAC ATTTCATGCC GGTCAGCCTG 
CTGGAAAGCC AGCTTGCAAC ACTGGAAAGC CCGACCGGTG AGCCTTGTGT GGTGACAGTT 
GATATTGATC GCAGCATCGA CGCCATTGTC GAGGCCGCAG CAGCCGGGCT GTCGGAGCTG 
GAATAA 

 

Protein sequence

MTAHQTADTV ATRPWAIIVM GVSGCGKSSI GEGLAKKLDA PFLEGDSLHP AANVEKMAKG 
TPLNDEDRWP WLQAIGDKMA AALQEGQTII VSCSSLKKSY RDLLREATGN RTAFIYLEGS 
KELLTRRMGE RTGHFMPVSL LESQLATLES PTGEPCVVTV DIDRSIDAIV EAAAAGLSEL 
E