| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0825 |
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| Symbol | |
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| ID | 7386307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 705398 |
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| End bp | 706213 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650378 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002548588 |
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| Protein GI | 222147631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTG GCCGTTTCGA TCCCGTTTTT CTCACTTTCG GTTTCGCCTT TCTCTATGTG
CCGATCCTGA TCCTGGTGAT CTTCTCGTTC AATGCGTCGA AGCTGGTGAC GGTCTGGGGC
GGGTTCTCCC TGCGCTGGTA CCAGGAGATC TGGCAGAACG ACAGCCTGAT GGATGCTGCC
TGGGTCACGC TCAGGGTCGG CCTCATCTCA GCCAGCCTTG GCACGGTGCT CGGCACCATG
GCGGCGCTGG CGCTGGTGCG GTTCGGGCGG TTTCGTGGCC GCATGCTGTT TTCCGGCATG
GTCTATGCGC CGCTGGTCAT GCCCGATGTC ATCACCGGCC TGTCGCTGCT TTTGCTGTTC
GTTGCGCTGA ATGTCGATCG CGGCTTGATG ACCATTACGC TGGCCCATAC CAGCTTTACC
ATGTGCTATG TGGCCATCGT CGTGCAATCG CGGCTGGTGA CGTTTGATCG CAGTCTGGAA
GAGGCGGCGC TCGATCTGGG TTGCCCGCCG GTCAAGACCT TCTTCCGCAT CACCCTGCCG
CTAATCCTGC CAGCCGTCGT TTCCGGCTGG ATGCTGGCCT TTACCCTGTC GTTGGACGAT
CTGGTGATTG CCAGCTTCAC CACCGGGCCG GGCGCGACGA CGCTGCCGAT CAAGATCTAT
TCGCAGGTGC GTTTGGGTGT GACCCCGGAA ATCAACGCGG TTTGCACCAT ACTGATTGCC
GTTGTGACGC TTGGTGTGAT CATCGCCTCC ATCGGCACCA AGCGGCGTGA ATTGCAGCGT
CAGCGCGATG AGCATATTGC CGCTGCCGGA CGGTGA
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| Protein sequence | MKSGRFDPVF LTFGFAFLYV PILILVIFSF NASKLVTVWG GFSLRWYQEI WQNDSLMDAA
WVTLRVGLIS ASLGTVLGTM AALALVRFGR FRGRMLFSGM VYAPLVMPDV ITGLSLLLLF
VALNVDRGLM TITLAHTSFT MCYVAIVVQS RLVTFDRSLE EAALDLGCPP VKTFFRITLP
LILPAVVSGW MLAFTLSLDD LVIASFTTGP GATTLPIKIY SQVRLGVTPE INAVCTILIA
VVTLGVIIAS IGTKRRELQR QRDEHIAAAG R
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