Gene Avi_0820 details

Gene Information

• Locus tag: Avi_0820
• Symbol: potG
• ID: 7386305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 703306
• End bp: 704454
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650376
• Product: ABC transporter nucleotide binding/ATPase protein (putrescine)
• Protein accession: YP_002548586
• Protein GI: 222147629
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.768559
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGA CTCTGGGGCC GGTGAAACGC AAATTCGCAC CTTGGACGGA GCGGGGGCAA 
TTGCCCTTCA TCCGGTTTGA AAATGTTACC AAGCGGTTCG GACCGTTCAC GGCGGTCGAT 
AACCTTACCC TGAACATTTA CGAGCGGGAA TTTTTCTCGC TGCTGGGGCC ATCGGGCTGC 
GGCAAGACCA CGCTGATGCG GATGCTGGCC GGTTTCGAGG AGCCGACCGA GGGTCGCATC 
CTGTTGCAGG GCCGCGATCT CGCCGGTGTG CCACCCTATC GTCGTCCGAC CAATATGATG 
TTCCAGTCCT ATGCGTTGTT TCCGCATATG TCGGTGGAAA AGAACATCGC CTTCGGTCTG 
GAACAGGACA ATCTGCCCAA GGCCGAAATC AAGGCGCGGG TCGAGGAAAT GCTGAAACTG 
GTCAAGCTGG AGGAGTTTGC CAGGCGAAAG CCCAATCAGC TTTCCGGCGG CCAGCGCCAG 
CGGGTCGCCC TGGCCCGGTC GCTCGCCAAA CGTCCGAAAG TGCTGCTGCT GGATGAACCG 
CTCGGCGCGC TGGACCGCAA GCTGCGCGAG GAAACACAGT TCGAGCTGAT GGATCTCCAG 
ACAGAGCTTG GCCTGACCTT CCTGATCGTC ACCCATGACC AGGAAGAGGC GATGACGGTG 
TCGGACCGGA TCGCTGTCAT GGACAAGGGC GAAATCGTCC AGGTGGCGAC GCCCGCCGAA 
ATCTATGAGG CGCCGAATTG CCGTTACGTG GCGGATTTCA TCGGTGACAT CAATATTGTC 
GAAGGCCGGT TGCTGCGAAG CGATAGCGCT GGCGGCCCTG TGGCCATCGC CTGTGACGGC 
TTCACCAGCA TCGTCGATCA GCCCTGCGAT CTCGCTGACG GCGCCGAGGT TGCCTTTGCC 
ATCCGCCCGG AAAAGGTTCG TATCTCCATC GATCCTCCCG CCGATACCAG CGTCAATGCG 
CTTTCCGGTG AGGTCTGGGA TATCGGCTAT CTCGGCGATT TTTCGGTGTT CATCATCCGG 
TGCGAGGATG GCTTTACCTT CCGGGCAGCT CAGGCCAATG TCGCGCGCCT GGTAGACCGG 
CCGATCACGT TCGGCGATCA GGTCTGGTTT TCCTGGACGC CGGATGCCGG CCTGTTGTTG 
ACGAGGTAG 

 

Protein sequence

MAKTLGPVKR KFAPWTERGQ LPFIRFENVT KRFGPFTAVD NLTLNIYERE FFSLLGPSGC 
GKTTLMRMLA GFEEPTEGRI LLQGRDLAGV PPYRRPTNMM FQSYALFPHM SVEKNIAFGL 
EQDNLPKAEI KARVEEMLKL VKLEEFARRK PNQLSGGQRQ RVALARSLAK RPKVLLLDEP 
LGALDRKLRE ETQFELMDLQ TELGLTFLIV THDQEEAMTV SDRIAVMDKG EIVQVATPAE 
IYEAPNCRYV ADFIGDINIV EGRLLRSDSA GGPVAIACDG FTSIVDQPCD LADGAEVAFA 
IRPEKVRISI DPPADTSVNA LSGEVWDIGY LGDFSVFIIR CEDGFTFRAA QANVARLVDR 
PITFGDQVWF SWTPDAGLLL TR