| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0819 |
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| Symbol | potF |
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| ID | 7386304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 702088 |
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| End bp | 703203 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650375 |
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| Product | ABC transporter substrate binding protein (putrescine) |
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| Protein accession | YP_002548585 |
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| Protein GI | 222147628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCA CCGGGATTCG CTTTGCTGCC GCCGCCTTTG CGGCCATGTC CATCACTGCA
TCGACGGGCG CGCTGCCTGC CGGTGCTGCC GACCGGGAAG TACATGTCTA TAACTGGTCG
GATTATATCG ATCCGCAGAT TCTTGAGGAT TTTACCAAGG AAACCGGCAT CAAGGTCGTC
TATGACGTCT TCGACAACAA TGACCTGTTG GAAACCAAGC TTTTGGCCGG TGGTTCCGGC
TATGATGTGG TGGTGCCGAC CGGTCCGTTC CTGGCCCGGC AGATCCAGGC GGGCGTGTTC
CAGAAGCTCG ACAAGTCGAA ACTGCCGAAC CTCACCAATA TGTGGCCGAT GGTCATGGAG
CGGCTCGCCA ATTACGACCC CGGCAACCAA TATGCCGTCA ACTATATGTG GGGCACGACC
GGCATTGGCT ACAATGTCAA GAAGATCAAG GCGATCTTCG GCGATGACGT CAAGGTCGAC
AGCTGGGACT TCATCTTCAA GCCGGAAAAC GCCAAGAAGC TCAAGCAGTG CGGCTTGAAC
ATCCTCGACG CCTCGGATGA AACCTTCGCG ATTGCCATGA ACTACATCGG CAAGCCGGCT
GACAGCAAGA AAACAGCCGA TCTGGAAGCG GGCGCCAAGG TCTACCAGGC GATCCGGCCC
AGTGCCAAGA CCTTCAACTC CTCCTCCTAC CTGAATGATC TCGCCAATGG CGATATCTGC
GCCACCATCG GCTGGTCGGG CGATGTGATC CAGGCCAAGA AGCGGGCGGA AGAGGCCAAG
AACGGCGTGG AAATCGCCTA TGTGATCCCC AAGGAAGGAA CCTATATGTG GTTCGACAAC
CTGGCGATCC CGGCGGATGC CAAGAATGTC GAGGAAGCCC ATGCCTTCAT CAATTACCTG
ATGAAGCCCG AGGTGATCGC CAAGGCGTCT GATTTCGTCT CTTACGCCAA TGGCAATCTG
GCCTCGCAAA AAATGGTCAG CGCCGATGTG CTGAACAATC CCTCCGTCTA TCCCGACGAG
GCGACCATGA AGCGGCTGTT CACCATCTCG CCTTACGATC CCAAATCGCA GCGCGTCCTG
AACCGGCTCT GGACCCAGGT CAAGACCGGC AAGTAA
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| Protein sequence | MTSTGIRFAA AAFAAMSITA STGALPAGAA DREVHVYNWS DYIDPQILED FTKETGIKVV
YDVFDNNDLL ETKLLAGGSG YDVVVPTGPF LARQIQAGVF QKLDKSKLPN LTNMWPMVME
RLANYDPGNQ YAVNYMWGTT GIGYNVKKIK AIFGDDVKVD SWDFIFKPEN AKKLKQCGLN
ILDASDETFA IAMNYIGKPA DSKKTADLEA GAKVYQAIRP SAKTFNSSSY LNDLANGDIC
ATIGWSGDVI QAKKRAEEAK NGVEIAYVIP KEGTYMWFDN LAIPADAKNV EEAHAFINYL
MKPEVIAKAS DFVSYANGNL ASQKMVSADV LNNPSVYPDE ATMKRLFTIS PYDPKSQRVL
NRLWTQVKTG K
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