Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0816 |
Symbol | aceA |
ID | 7386302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 699018 |
End bp | 700307 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650373 |
Product | isocitrate lyase |
Protein accession | YP_002548583 |
Protein GI | 222147626 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.745785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT TTTACAAACT CGTTCCCTCC GCGCCACAAG GCCGTTTCGA TGGCGTTGAG CGGACCTATT CGGCAGAGGA TGTCAAGCGG CTGCGTGGCT CCGTGGATAT CCGCTATTCG CTGGCAGAAA TGGGGGCGAA CCGGTTGTGG CAGCTGATCG GCCAGGAGGA TTTCGTCAAT GCGCTGGGGG CGCTATCGGG CAATCAGGCC ATGCAGATGG TGCGCGCCGG GTTGAAGGCG ATCTACCTTT CCGGCTGGCA GGTTGCCGCG GACGCCAATA CCGCGTCCTC CATGTATCCC GACCAATCGC TCTACCCTGC CAATGCGGCC CCGGAACTGG CCAAGCGGAT CAACAAGACC CTGCAACGGG CCGACCAGAT CGAAACCCAG GAAGGCAAGG GCCTGTCGGT CGAGACGTGG TTTGCACCGA TTGTTGCCGA TGCGGAAGCT GGTTTTGGCG GGCCGCTCAA TGCTTTCGAG ATCATGAAAG CCTTCATTGA GGCGGGTGCG GCGGGCGTCC ATTACGAAGA CCAGTTGGCG TCGGAGAAGA AATGCGGCCA TCTGGGCGGC AAGGTGTTGA TCCCGACCGC CGCCCATATC CGCAACCTGA CCGCCGCCCG GCTTGCCGCC GACGTGATGG GCACGCCAAC GCTGATCATC GCCCGCACCG ATGCCGAGGC CGCCAAGCTG CTGACCTCTG ATATCGATGA GCGCGACCAG CCTTTTGTGG ACTATGATGC GGGTCGCACT GCCGAAGGCT TTTACCAGGT ACGAAACGGC ATCGAGCCCT GCATTGCCCG CGCCATTTCC TATGCGCCTT ATTGCGATCT GATCTGGATG GAGACCTCCA AGCCGGATCT GGAACAGGCC CGCAAATTCG CGGAGGCCGT GCATAAGGTG CATCCGGGCA AGAAGCTGGC CTATAATTGC TCGCCATCCT TTAACTGGAA AAAGAACCTC GATGACGCGA CCATTGCCAA GTACCAGAAG GAACTGGGCG CCATGGGCTA CAAGTTCCAG TTCATCACGC TGGCGGGCTT CCATCAGCTG AACTACGGCA TGTTTGAACT GGCGCGTGGC TACAAGGACC GGCAGATGTC CGCCTATTCC GAGCTGCAAC AGGCGGAATT TGCCGCAGAA GCCAATGGCT ACACCGCCAC CAAGCATCAG CGCGAAGTTG GCACCGGCTA TTTCGATGCG GTTTCCATGG CGATTTCCGG TGGCACGTCC TCAACCACGG CCATGAAGGA GTCGACCGAA CATGACCAGT TCCGCCCTGC TGCTGAATGA
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Protein sequence | MTDFYKLVPS APQGRFDGVE RTYSAEDVKR LRGSVDIRYS LAEMGANRLW QLIGQEDFVN ALGALSGNQA MQMVRAGLKA IYLSGWQVAA DANTASSMYP DQSLYPANAA PELAKRINKT LQRADQIETQ EGKGLSVETW FAPIVADAEA GFGGPLNAFE IMKAFIEAGA AGVHYEDQLA SEKKCGHLGG KVLIPTAAHI RNLTAARLAA DVMGTPTLII ARTDAEAAKL LTSDIDERDQ PFVDYDAGRT AEGFYQVRNG IEPCIARAIS YAPYCDLIWM ETSKPDLEQA RKFAEAVHKV HPGKKLAYNC SPSFNWKKNL DDATIAKYQK ELGAMGYKFQ FITLAGFHQL NYGMFELARG YKDRQMSAYS ELQQAEFAAE ANGYTATKHQ REVGTGYFDA VSMAISGGTS STTAMKESTE HDQFRPAAE
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