| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0789 |
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| Symbol | aglK |
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| ID | 7386285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 672850 |
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| End bp | 673938 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650356 |
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| Product | ABC transporter |
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| Protein accession | YP_002548566 |
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| Protein GI | 222147609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCT TGGTCCTGAA AGACATTCGC AAGGCCTATG GACAGGTCAA GGTGCTGCAC
GGCATCGACC TAGACATCGC CAAGGGCGAG TTCGTGGTGT TTGTCGGTCC GTCCGGCTGC
GGCAAATCCA CGCTTTTGCG GATGATTGCC GGACTGGAAG ATATTACCAG CGGCGAGATG
CGCATTGACG ACCAGATTGT CAATGACGTG CCGCCCTCCA AGCGCGGCAT TGCCATGGTC
TTCCAGTCCT ATGCGCTCTA CCCGCATATG ACCGTCTATG ACAACATGGC TTTCGGCATG
CGGATCGCCG GTGAAAACAA ACAGGAAATC GAGCGGCGGG TGCGCGCCGC CGCCGCTATC
CTGCAATTGG AGCCCTATCT CGACCGCTTG CCCAAGGCCT TGTCGGGCGG CCAGCGCCAG
CGTGTGGCCA TCGGACGGGC GATCTGCCGC GATCCGAAAG TCTTTCTGTT CGACGAACCG
CTCTCCAATC TCGATGCAGC CCTTCGCGTC GCCACCCGGA TTGAAATCGC CCGTCTGCAC
GAACAGATGT CCGATACCAC GATGATCTAT GTCACCCATG ATCAGGTCGA GGCGATGACG
CTGGCCGACC GGATTGTCGT GTTGTCGGCG GGCCGGATCG AACAGGTCGG CGCGCCGCTG
GAGCTTTACG AGCGCCCCGC CAATCTGTTC GTTGCCCAGT TCATCGGCTC GCCCGCCATG
AACATCCTGC CGGCCACTAT CGTCGAGGCC GGGTCTGAAA CGCGCATTGC GCTCAAGGAT
CGCTCAACCC TGTCGGTGCC GATTGCTGTG CCTACAGAAG ATGCAGGCAA GGCGGCCAGT
TTCGGGGTAA GGCCGGAGGA TTTGACCATT GCCGCCGAAG GTCCGGCGCT GTTTGAAGGC
ACCGTCTCCC TGGTCGAGGC CCTGGGCGAG GTGACAATGC TCTATGTCGA CGGCCCGGTC
GAGGGGCAGC CGGTGGTGGT GAAACTGCCG GGCATTGCCA AGGTTGCCAG GGGCGACCGG
CTGCGCTTTG CCGCAGAGGG TGAAAAGCTA CATCTTTTTG ATGCGCAGGG GCAAAGCTAC
AAGCGTTGA
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| Protein sequence | MASLVLKDIR KAYGQVKVLH GIDLDIAKGE FVVFVGPSGC GKSTLLRMIA GLEDITSGEM
RIDDQIVNDV PPSKRGIAMV FQSYALYPHM TVYDNMAFGM RIAGENKQEI ERRVRAAAAI
LQLEPYLDRL PKALSGGQRQ RVAIGRAICR DPKVFLFDEP LSNLDAALRV ATRIEIARLH
EQMSDTTMIY VTHDQVEAMT LADRIVVLSA GRIEQVGAPL ELYERPANLF VAQFIGSPAM
NILPATIVEA GSETRIALKD RSTLSVPIAV PTEDAGKAAS FGVRPEDLTI AAEGPALFEG
TVSLVEALGE VTMLYVDGPV EGQPVVVKLP GIAKVARGDR LRFAAEGEKL HLFDAQGQSY
KR
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