| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0783 |
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| Symbol | aglR |
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| ID | 7386280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 666124 |
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| End bp | 667152 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650351 |
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| Product | transcriptional regulator repressor |
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| Protein accession | YP_002548561 |
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| Protein GI | 222147604 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTGA AGCAATTGTC GCAGATGCTC GGCCTGTCGC AGACGACGAT CAGCCGGGCA
TTGAACGGCT ATCCGGAGGT CAACGAAGAG ACCCGCCAGC GCGTTGCCAA GGCCGCTGCT
GAGACCGGCT ACCGGCCAAA CCGCGCAGCC CTGCGGCTGG CAACCGGCAA GGCCGGTTCG
CTAGGACTGG TCATGCCGAT TTCCCCGGAT CATAGCTCCG ACATCCATTT CGCGGAATTC
CAGAGTGGGC TTGCCGAGAC CTGTCTTCAG CATGAATTTC ACTTCGTCAT CATTCCGGCC
CATCCCCAGG CGGAAGAGCA GGCCATTCGC GGCCTGGTCG GCAGCGGCGC GGTGGATGCC
TTTTACCTCG CCTATCTCAG GGCCAATGAT CCGCGCATTG CCATGGCGAA ATCGCTTTCG
GTGCCCTTCA TCGTGCATGG CCGCTCTCAA GGCATTGCCG AGGACTATCC CTATCTTGAT
ATCGACAATG AAGGCGCTTT CCGGCAGGCG ACGGATCTGA TGATCGGGCT TGGCCACCGC
CGATTTGCGC TTTTGAACGG CCCGGCAGAC CTCGATTTCG CCCTGCGCCG ATTGCAAGGC
ACGCAAAAGG CGCTTGCAGC CGCAGGCCTT GTCCTGCCGC CGGAGGCAAT CAGCCATACA
CTCATGACTG ATGAGTGGGG CTACCGGAAA ATGAGCGCCC TGCTCCATCA GCCAGAGCGT
CCAACCGCCG TCCTCTGCGC CAGTACAGTG CTGGCGCTGG GGGCTGTGCG GGCCATCAAC
GATGCCGGGC TGACGGTGGG TCAGGATATT TCGCTGGTCG CCCATGACGA CGACCTGCCG
CTGCTAAAGC CGGAGCATTT CCGGGTGCCG CTCACCACGA CACGCTCATC GCTCCGAGAC
GCTGGAAGGC GGGTGGCGCA ACGGCTGATC GCCGACATTG CCCAGCCCCC GAACGGGCCT
CCCCTCCAGG AAATCTGGCA GGCCGAACTG GTGATCCGGG CCTCGACCGG CCCGGCACCT
GGAAAATGA
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| Protein sequence | MNLKQLSQML GLSQTTISRA LNGYPEVNEE TRQRVAKAAA ETGYRPNRAA LRLATGKAGS
LGLVMPISPD HSSDIHFAEF QSGLAETCLQ HEFHFVIIPA HPQAEEQAIR GLVGSGAVDA
FYLAYLRAND PRIAMAKSLS VPFIVHGRSQ GIAEDYPYLD IDNEGAFRQA TDLMIGLGHR
RFALLNGPAD LDFALRRLQG TQKALAAAGL VLPPEAISHT LMTDEWGYRK MSALLHQPER
PTAVLCASTV LALGAVRAIN DAGLTVGQDI SLVAHDDDLP LLKPEHFRVP LTTTRSSLRD
AGRRVAQRLI ADIAQPPNGP PLQEIWQAEL VIRASTGPAP GK
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