| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0772 |
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| Symbol | flhA |
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| ID | 7386272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 658864 |
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| End bp | 660954 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650343 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_002548553 |
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| Protein GI | 222147596 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAG CACCGACGAC CTCACTTCCG ACAATTGCCA ATAATCGCGG CCGAGAAATC
GGCTTTGCCA TGGGCATTGT CGCTATTCTC TGCATTCTCT TTCTGCCGAT CCCACCCTTC
CTGATCGATA TGGGGCTGGC GTTTTCCATT GCCCTTTCCG TTCTGATCCT GATGGTATCG
CTCTGGATAC AACGGCCGCT GGATTTCTCC TCTTTCCCGA CCATTCTGCT GATTTCGACC
ATGGTGCGCT TGTCGCTGAA TATCGCGACG ACACGGGTTA TCCTGTCGCA TGGTCATCAG
GGTCACGATG CGGCCGGCAG TGTCATTGCC GGCTTTGCCA ACCTGGTTAT GTCCGGCGAT
TTCGTGATCG GTCTGATCGT GTTTGCGATC CTGGTCACCG TCAACTTCAT CGTCATCACC
AAGGGTGCCA CCCGTATCGC GGAAGTGGGC GCCCGCTTCA CGCTGGATGC CATTCCCGGC
AAGCAGATGG CGATCGATGC CGATCTCTCG GCGGGGATTA TCGAGGAAAG CGAAGCTCAA
CGCCGGCGCA AGGAACTGGA GCAGGAAAGC TCCTTTTTCG GCGCGATGGA CGGTGCCTCG
AAATTCGTGC GCGGCGATGC GGTCGCTGGT CTGATCATCA CCGCCATCAA TATCGTCGGT
GGCATTATCA TCGGTTACTT CCGCCATGGC ATGCCGATCA GCGAAGCAGC CGATGTGTTC
GTCAAGCTCT CGGTGGGCGA TGGCCTGGTC TCGCAGATCC CCGCTCTGAT CGTCTCGCTC
GCCGCCGGCC TGCTCGTCAC CCGTGGCGGC AATGCCGGGT CCACGGACGA AGCGGTCATC
AACCAGCTGA GCGGCTATCC GCGTGCGTTG TCGGTCGCTT CTGGCCTGAT GTTCCTTCTG
GCGATCATTC CGGGCCTGCC CTTGCTGCCC TTCGTGATCC TGGGTGGTCT CATGGCGTTC
GGCAGCTGGT ACATTCCCCG CCAGGTGGAA GCCGTGAACC TTGCCAAGCG CCAGGTCGAG
GAAAAGAAGG TTATTCAGAA CAAGGAAGCC GAAAAGGATT CGGTCAAGAG CGTGCTGAAA
ACCTCCGAGA TCGAGCTGGC GCTCGGCAAG CTGGTTTCGA CCCGCCTGCT TGGCTCGCAT
CAGGAACTGG CTTTCCGCGT CGGCAAGATG CGCAAGAAAT TCGCCAGCCA ATATGGTTTT
GTCGTGCCTG AAATCAAGGT GACGGACGAT ATCGCCATCC CGGACAAGTC CTATCATATT
CGGGTCCATG GCACGACCAT CGCCTCGAAC CTGTTGCGGG TTGGCGAAGT GCTTGTTGTC
ACCGGCAATG GCCGCAAGCC GCGCATTCCC GGTGACGAAA TTCGCGAACC CGCATTCGGC
ATGCCAGCCG TCTCGATCAT GGAAGCCTTT ACCGAAGACT TGAAGCGCGA AGGCTTTCAT
CCGATCGACA ATGTCTCTGT CGTGCTAACC CATTTGAGCG AGGTGATCCG CAACAATCTG
CCTCAGCTCT TGTCCTATAA GGACGTGAAA ATCCTGATCG ATCGGCTCGA TCCTGAATAT
AAGAAGCTGG CAGACGAAAT CTGCTCCTCG CATATGTCCT ATTCAGGTTT GCAAGCCGTG
TTGAAACTGT TGTTGGCCGA ACGGGTGTCG ATCCGTAACC TGCATCTGAT CCTCGAGGCC
GTGGCCGAAC TGGCGCCGCA TGTGCGCAAG ACCGAGCAGA TCGTTGAACA TGTGCGTGTG
CGCATGGCTC AGCAATTGTG CGGCGATCTG ACCGACAATG GCGTGCTGCG GGTTCTGCGA
TTGGGCAGCA AATGGGATCT GGTCTTCCAT CAGGCCCTGA AGCGCGACAA CAAGGGTGAG
GTTGTCGAAT TCGATATCGA CCCGCGTTCG CTGGAAGAGT TCAGCGAGCA GGCAAGCCGG
GTTATCCGTG AATTCATGGA CCGCGGCCTG CCTTTCGTGC TTGTCACGTC GCCGGAAACG
CGGTCTTATG TGCGCATGAT TATTGAACGC TTGTTTGCAA CCCTGCCGGT GCTGTCACAT
GTCGAATTGG CCAAAGGCAT CGAAATCAAG ATCCTGGGAT CGATTTCATG A
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| Protein sequence | MAQAPTTSLP TIANNRGREI GFAMGIVAIL CILFLPIPPF LIDMGLAFSI ALSVLILMVS
LWIQRPLDFS SFPTILLIST MVRLSLNIAT TRVILSHGHQ GHDAAGSVIA GFANLVMSGD
FVIGLIVFAI LVTVNFIVIT KGATRIAEVG ARFTLDAIPG KQMAIDADLS AGIIEESEAQ
RRRKELEQES SFFGAMDGAS KFVRGDAVAG LIITAINIVG GIIIGYFRHG MPISEAADVF
VKLSVGDGLV SQIPALIVSL AAGLLVTRGG NAGSTDEAVI NQLSGYPRAL SVASGLMFLL
AIIPGLPLLP FVILGGLMAF GSWYIPRQVE AVNLAKRQVE EKKVIQNKEA EKDSVKSVLK
TSEIELALGK LVSTRLLGSH QELAFRVGKM RKKFASQYGF VVPEIKVTDD IAIPDKSYHI
RVHGTTIASN LLRVGEVLVV TGNGRKPRIP GDEIREPAFG MPAVSIMEAF TEDLKREGFH
PIDNVSVVLT HLSEVIRNNL PQLLSYKDVK ILIDRLDPEY KKLADEICSS HMSYSGLQAV
LKLLLAERVS IRNLHLILEA VAELAPHVRK TEQIVEHVRV RMAQQLCGDL TDNGVLRVLR
LGSKWDLVFH QALKRDNKGE VVEFDIDPRS LEEFSEQASR VIREFMDRGL PFVLVTSPET
RSYVRMIIER LFATLPVLSH VELAKGIEIK ILGSIS
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