| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0770 |
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| Symbol | fliQ |
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| ID | 7386271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 658474 |
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| End bp | 658740 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650342 |
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| Product | flagellar biosynthesis protein FliQ |
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| Protein accession | YP_002548552 |
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| Protein GI | 222147595 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAAG CAGATGCCCT CGATATCATG CGCGCCGCTG TATGGACCGT GCTGATTGCC
TCGGGGCCAG CCGTTCTGGC CGCGATGATC GTCGGCGTCG TGGTCGCCTT GATCCAGGCA
TTGACCCAGA TCCAGGAAAT GACCCTGACA TTCGTCCCAA AAATCGTTGC GATCATGGTG
ACGATCGGTA TTTCCGCTCC CTTTGTCGGG TCTCAAATTT CGATTTTTGC CAATCTGGTG
TTTTCCCGGG TCCAATCCGG CTTTTAA
|
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| Protein sequence | MNEADALDIM RAAVWTVLIA SGPAVLAAMI VGVVVALIQA LTQIQEMTLT FVPKIVAIMV
TIGISAPFVG SQISIFANLV FSRVQSGF
|
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