Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0760 |
Symbol | |
ID | 7386262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 649730 |
End bp | 651589 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650333 |
Product | chemotaxis motility protein |
Protein accession | YP_002548543 |
Protein GI | 222147586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.733725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATG CCACTATCAC AGCAGGTTCT GCCGCTTCGC CAGCCTATAG CAGCAGCCGT TCCGACCAAG GCAAGGGCGC GGGCAAGGGG TTTCTGGACG CTCTGGCCGA TACGGCTGAC CGTAGCCAAG CGCAGGAGCA AAAAGCAGAC GATGACGATG CTCCTGTCGA TCAGGACCAG ACACAGACCC GTTCGACTGC GTCTTCGTCG CCATCGGCCA AATCAACCAC GTCCACAGCG ACATCTGCTA CAGCATATCA GGAGCGTTCG GCTCAGGCGG AGCAGTCGCA GCTTGGTAAT GTGGCTGATG ATGAAGCCAC TGGCGCCAGC GATGACGGCA AAGCACCGTC GCAAACCGTC GGCAATGCGC CGATAGCTGC TGGCGACTCC AAGGCGGCTG CTTTGATTGC CAAGGCTTTG GCGAGCCAGA CCAAGACACA AGCTCAAACC CAAGCTGAGG GCCAGACACA AGGGCAAACA GACACCGCAT CTTCCTCCGG GGAGAAGACG GATGAGAGCC GGATGCTCGC AAAGCTTGTT GCGGCCCTGA CCCAGCAGGA TGATGCCACG ACTGAGGCTG CTACTGCTGG CGCAAATGCA GAAGAAGCGA CCGCTGCCGA AACTGACGGC GCTGGAGATG ATACCGGCAA GATCGCCATC AAGGGCCGGC AGGAAAACAG TGCGCCTTTG CTCGCAGCCC TGGCAGCCCT CAAGTCGACA GCGACCGATG AGGAAGCCGC TACGGCGGCG GCTCAGTCAG ACATGCCGGG GGTTACGAAA ACCCAGACCA AGGACAGTTC CAAGACGGCA AAGCCTGCCG CAGAGGATAC AAAAGACACT GCTGCAGAGC CAAAGGCAGC GACGGGCGCC CAGGATGCCT TGACATTATT GGGCGATTTG AGCGCCGGAC AATTGCAGCA CGCTGCCCGT CAAGCAGGCA GCCAGACAGC CGCCGGGTCG GCCACCAGTA ACGGCGATAC GGCATTGACT GCCGTCGCCG GCCAGGTTGC GTCGCAGGAT GACAAGACGG GTAAGATCGG CCAGGGTACC GCAGCGGTTG ATTTTGCCAA GCAGGCCAAG TCCGTCCAGT CGGGGCAGCA GGATGCCGTT TCACCGGCGA GCAAGGAAAC GGTCAAAGAT AGCAGTGTTG CGGATGCCCT GCATATGGTC ACCAGCAGCG ATGCCTCGGC GGCGTCGCCT GCCGATGATA CCGCAAGCCA GCCAGCAACG ACAGGTATCG ATCCGTTGCA GAATGTCAGC GTGCTCGACA GCCGACGCAT TATTGCCCCG GTCAACACCA GCAATGGCGC CAATATTGCC GCATCCATGG CTGGTGACAG TTCCTGGGCG CAGGCGATGC ACAGTCATGC TTCCGATAAG CTCAGCGCCA GCGAACAGAT CAGCACCGAT CGAACGATGA ACACGCTCAA ACTGAAGATG ACGCCGGAAA ATCTTGGAGG TGTCACGGCG ACATTGAAGC TGACGAATGG CGAATTGACG GTCAGCCTGG TTGTTGAAAA CAGCGCGGCT TATCGAAAGC TGAACGAAGA CCAGAACGGT CTTGTGGCGG CGCTGAAAAG CCACGGCTTC TCCGTGGACA ACGTCCAGAT CAGCATAGCC AGCACTGAAA AGCCCAGTAA TGACGCCAAC CAGACCAATT CCCAGAGCCA GAGCAGCAAT CAGCAGAGCA TGCAGCAGGG CGGTGGCAGT TCCAGCCAGG GCGGCAACCG CTCACAAGCG CAGCCGATTT TTGATGTTTA TGGACAGACA TCCGGAGGTC CAGTCGATGA TGCGGCACGT TCTGCGACGG TGGGCACCGG CGGCAATGCT TCTGGCGGTA GCGGTCAGCT TTACCTGTAA
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Protein sequence | MIDATITAGS AASPAYSSSR SDQGKGAGKG FLDALADTAD RSQAQEQKAD DDDAPVDQDQ TQTRSTASSS PSAKSTTSTA TSATAYQERS AQAEQSQLGN VADDEATGAS DDGKAPSQTV GNAPIAAGDS KAAALIAKAL ASQTKTQAQT QAEGQTQGQT DTASSSGEKT DESRMLAKLV AALTQQDDAT TEAATAGANA EEATAAETDG AGDDTGKIAI KGRQENSAPL LAALAALKST ATDEEAATAA AQSDMPGVTK TQTKDSSKTA KPAAEDTKDT AAEPKAATGA QDALTLLGDL SAGQLQHAAR QAGSQTAAGS ATSNGDTALT AVAGQVASQD DKTGKIGQGT AAVDFAKQAK SVQSGQQDAV SPASKETVKD SSVADALHMV TSSDASAASP ADDTASQPAT TGIDPLQNVS VLDSRRIIAP VNTSNGANIA ASMAGDSSWA QAMHSHASDK LSASEQISTD RTMNTLKLKM TPENLGGVTA TLKLTNGELT VSLVVENSAA YRKLNEDQNG LVAALKSHGF SVDNVQISIA STEKPSNDAN QTNSQSQSSN QQSMQQGGGS SSQGGNRSQA QPIFDVYGQT SGGPVDDAAR SATVGTGGNA SGGSGQLYL
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