Gene Avi_0744 details

Gene Information

• Locus tag: Avi_0744
• Symbol: flgH
• ID: 7386251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 637118
• End bp: 637831
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643650322
• Product: flagellar basal body L-ring protein
• Protein accession: YP_002548532
• Protein GI: 222147575
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.250643
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAGC GTAGCGCTGT GGTTCTCATG GCCGTTATCC TCACCGGCTG TGGGAACAAG 
ACATTGGAAG AAGTCGGCAA TGCTCCGGCC ATGAGCCCGG TGGGCAGCGG CTTGCGTTAC 
AATCAGGCGC CGCAGCTTGC CAGCTATCCG AAGCAGACCA AGGCTGTCAG CAACGGCTAC 
TCCCTCTGGA ACGACAGCCA GGCGGCGCTT TTCAAGGATT CGCGCGCCAT CAATGTCGGG 
GATCTGCTGA CGGTCAATAT CTCGATTGCC GACAAGGCGA AGTTCAAGAA CGACACATCA 
CGCAGCCGTA AGAACTCGAC ATCGCTGACA TGGTCGACGG TGATCAACCT GTTCGGCATC 
ACACCGCCAG ATTCGTCCGG CGACATGAGC ACCGATTCGA ATTCGAGTTC CGATGGCAAG 
GGATCGGTCG ATCGGTCTGA AACGCTGACC TTGATGGTGG CGGCTGTGGT GACCAGCATT 
CTTGAAAACG GCAATCTGCT GATCAGCGGT TCCCAGGAAG TGCGCGTCAA CCATGAAGTC 
CGCATTCTGA ATGTCGCGGG TATTGTGCGC CCGCAGGATG TCGATGCCAA GAACACCATT 
TCCTATGAGA AGATCGCAGA GGCCCGCATT TCTTACGGCG GCAAGGGACG TTTGACGGAG 
GTGCAGCAGC CGCCGGTTGG CCAGCAGGTC GTCGACATGT TCTCCCCATT CTGA 

 

Protein sequence

MIKRSAVVLM AVILTGCGNK TLEEVGNAPA MSPVGSGLRY NQAPQLASYP KQTKAVSNGY 
SLWNDSQAAL FKDSRAINVG DLLTVNISIA DKAKFKNDTS RSRKNSTSLT WSTVINLFGI 
TPPDSSGDMS TDSNSSSDGK GSVDRSETLT LMVAAVVTSI LENGNLLISG SQEVRVNHEV 
RILNVAGIVR PQDVDAKNTI SYEKIAEARI SYGGKGRLTE VQQPPVGQQV VDMFSPF