Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0716 |
Symbol | |
ID | 7388740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 617987 |
End bp | 619612 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650302 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002548512 |
Protein GI | 222147555 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTA TTGAAAATAT CTCCAAGCAG AACAGCCATC GCCTGTTGTT CATCGAGGCC TCCGCCGCCC TGAACAAGGG GGAGAAGATC GGCCTGGTCG GGCCAAATGG CGCTGGAAAG ACCACGCTGT TTCGGATGAT CACCGGCGAG GAATTGCCGG ACGAAGGCCA GGTCGCGACC GAAAAAGGTG TGACCATCGG CTATTTCAAC CAGGATGTCG GCGAAATGTC CGGGCGTTCG GCGGTCGCCG AGGTCATGGA CGGGGCAGGG CCGGTCAGCA CGGTGGCGGC AGAATTGCGC GAGCTGGAAG GTGCCATGTC GGACCCCGAC CGGATGGATG AGATGGATGC GATCATCGAG CGCTATGGCG AGGTGCAGGC GCGCTATGAA GAGCTGGATG GATACGCTCT GGAAGGCCGC GCGCGCGAGG TGCTGGATGG GCTGAGCTTT TCCCAGGAGA TGATGGATGG CGACGTCGGC AAGCTGTCGG GTGGCTGGAA GATGCGCGTG GCACTGGCGC GTATTCTATT GATGCGGCCC GATGTGATGC TGCTTGACGA ACCGAGCAAC CATCTCGACC TCGAAAGCCT GATCTGGCTG GAAAGCTTCC TGAAGAATTA TGATGGTGCC TTGTTGATGA CCTCGCATGA CCGCGAGTTC ATGAACCGGA TCGTCACCAA GATCATCGAG ATCGATGGCG GTTCGCTGAC CAGCTATTCC GGTGACTATG GCTTTTACGA GGGCCAGCGC GCCCAGAACG AGAAGCAGCA GCAGGCGCAA TTCGAGCGTC AGCAGGCAAT GCTGGCCAAG GAAATCAAGT TCATCGAGCG GTTCAAGGCG CGTGCCTCCC ATGCGGCCCA GGTGCAGAGC CGGGTGAAGA AACTCGACAA GATCGACCGG GTCGAGCCGC CGCGCCGCCG CCAGACGGTG GCGTTCGACT TCCTGCCCGC GCCGCGCTCC GGCGATGACG TCATCAATAT CAAGAATGTC CATAAGGCCT ATGGCAGCCG GACGATTTAT CAGGGGCTGG ATTTCATGGT CCGCCGGCGC GAACGCTGGT GCATCATGGG TATCAATGGC GCTGGAAAAT CGACGCTGCT GAAGCTGGTT GCTGGCACGA CCGAGCCGGA TCAAGGCACG GTCAGCATCG GCGCCAGCGT CAAGCTCGGC TATTTCGCCC AGCATGCCAT GGATGTGCTG GATGGCGACA GCACTGTGCT GCAATGGCTG GAGGAAAGCT TTCCGAAGGC AGGGCAGGCC CCGCTCCGGG CATTGGCCGG TTGCTTCGGC TTTTCCGGCG ACGATGTCGA AAAGCGCTGC CGGGTGCTGT CAGGCGGCGA GAAAGCGCGG TTGGTGATGG CGGCCATGCT GTTCGACCCA CCAAATCTGC TGGTTCTGGA CGAGCCGACC AACCATCTGG ATCTCGACAC CAAGGAAATG TTGATCAAGG CGCTGTCGGC CTATGAAGGC ACCATGCTGT TCGTCAGCCA TGACCGGCAT TTTCTGGCCG CCTTGTCTAA CCGCGTCCTG GAACTGACGC CGGATGGCAT CCATCAATAT GGCGGCGGTT ATACCGAATA TGTGGAGCGC ACCGGCCAGG AAGCGCCCGG CCTGCATGCA GCATAA
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Protein sequence | MIRIENISKQ NSHRLLFIEA SAALNKGEKI GLVGPNGAGK TTLFRMITGE ELPDEGQVAT EKGVTIGYFN QDVGEMSGRS AVAEVMDGAG PVSTVAAELR ELEGAMSDPD RMDEMDAIIE RYGEVQARYE ELDGYALEGR AREVLDGLSF SQEMMDGDVG KLSGGWKMRV ALARILLMRP DVMLLDEPSN HLDLESLIWL ESFLKNYDGA LLMTSHDREF MNRIVTKIIE IDGGSLTSYS GDYGFYEGQR AQNEKQQQAQ FERQQAMLAK EIKFIERFKA RASHAAQVQS RVKKLDKIDR VEPPRRRQTV AFDFLPAPRS GDDVINIKNV HKAYGSRTIY QGLDFMVRRR ERWCIMGING AGKSTLLKLV AGTTEPDQGT VSIGASVKLG YFAQHAMDVL DGDSTVLQWL EESFPKAGQA PLRALAGCFG FSGDDVEKRC RVLSGGEKAR LVMAAMLFDP PNLLVLDEPT NHLDLDTKEM LIKALSAYEG TMLFVSHDRH FLAALSNRVL ELTPDGIHQY GGGYTEYVER TGQEAPGLHA A
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