Gene Avi_0612 details

Gene Information

• Locus tag: Avi_0612
• ID: 7389000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 529864
• End bp: 530511
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650228
• Product: hypothetical protein
• Protein accession: YP_002548440
• Protein GI: 222147483
• COG category: [S] Function unknown
• COG ID: [COG1284] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCAA CAGACAAACA GGCAGGCAAG TCCCGCAAGC CCATCGCCTC AAGTCCTGAA 
CAGCATTCCC TGCTGGACGA TGTGCAGGGT TTGCTGGCGG GCAGCATGCT GGCGGCGCTG 
GGCGTCGTCT TGTTGTCCAA TGCCAAATTG CTTTCCGGCG GCACAGCGGG GGTCGCCTTT 
CTGCTGCATT ATGTGTCGGC TGTGGGGTTT GGCCCGATCT TCTTTGCCAT CAACCTGCCC 
TTCTACTATT TCGCTTTCCG GCGGATGGGT CTGGCCTTCA CGGCTAAAAC CTTCATCGCG 
GTGCTGCTGA CCTCCGTGCT GAGCGCCATC CTGCCGAAAT TCATCGGCTT TTCCCTGCTG 
GACCCTTTGG TGGCGGCCAT CTTCGGCGGG CTGCTGGTGG GAACTGGCAT GCTGGTGCTG 
TTTCGCCACC AGGCAAGCCT TGGCGGCTTC GGTATCTTGG CGCTGTATCT CCAGGATCGC 
TACGGCTGGC GGGCCGGACT TGTGCAGCTT TGCTTTGACG GCATGGTGCT GATCGGCTCG 
TTCTTCGTGG CGACGCCCGG CATCATTGCC TGCTCGATCA TCGGCGCTGT TGTCGTCAAC 
CTGACGCTGG CGATCAATCA CCGCAAGGAT CGCTATATCG CCATGTAG 

 

Protein sequence

MAATDKQAGK SRKPIASSPE QHSLLDDVQG LLAGSMLAAL GVVLLSNAKL LSGGTAGVAF 
LLHYVSAVGF GPIFFAINLP FYYFAFRRMG LAFTAKTFIA VLLTSVLSAI LPKFIGFSLL 
DPLVAAIFGG LLVGTGMLVL FRHQASLGGF GILALYLQDR YGWRAGLVQL CFDGMVLIGS 
FFVATPGIIA CSIIGAVVVN LTLAINHRKD RYIAM