Gene Avi_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0592 
Symbol 
ID7388985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp507109 
End bp507753 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID643650213 
Producthypothetical protein 
Protein accessionYP_002548425 
Protein GI222147468 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATGG CATTGATGAG CAATCTGTTC GGCATCTGGA ACGATAATCC CACCCGTCAC 
AACCGGGCCG AGGATATCCA GGGCATTATC TGCGGAACAA TGATTTCGGC GCTCGGCCTC 
TATCTGATTG CCAAGATTGG TCTCGTCACC AGCGGCATCG CGGGTCTTGC CTTCGTCATC 
CATTACTGGA CGGGCTGGAG CTTCGGTCTG GTGTTCTTCC TGCTCAACAT GCCTTTCTAC 
ATTCTCTCCA TCAAACGGGT CGGCTGGGAC TTTACCCTCA AAACCTTCGT GGCCGTGGCG 
CTGACCTCGT TTCTCGTCGA AATCGAAAGC CGTTTCATCG TCATCGAGAG CATCAACCCA 
GTCTGGGGCG CTATCCTCGC GGGTCTCCTG CTCGGCTTCG GCCTGCTGGC TCTCTACCGC 
CACCGCGCCA GCCTCGGCGG CATCGGCATC CTCGCGGTCT TCGTCCAGGA CCGTTTCGGC 
ATCCAGGCGG GATTGGTGCA ATTGGCCTTT GATGTCGTGG TCATGGCCCT CGCATTTACC 
GTGGTCAGCC CGTGGGTGGT TGGCTGCTCG ATTATCGGGG CAGTGGTGCT GAATGTGTTC 
GTGCTGATCA ACCATCGGTC GGATCGGTAT ATTGCGTTGC GGTGA
 
Protein sequence
MVMALMSNLF GIWNDNPTRH NRAEDIQGII CGTMISALGL YLIAKIGLVT SGIAGLAFVI 
HYWTGWSFGL VFFLLNMPFY ILSIKRVGWD FTLKTFVAVA LTSFLVEIES RFIVIESINP 
VWGAILAGLL LGFGLLALYR HRASLGGIGI LAVFVQDRFG IQAGLVQLAF DVVVMALAFT 
VVSPWVVGCS IIGAVVLNVF VLINHRSDRY IALR