| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0591 |
|---|
| Symbol | |
|---|
| ID | 7388984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 506006 |
|---|
| End bp | 506986 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643650212 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_002548424 |
|---|
| Protein GI | 222147467 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCA TTCAGCCCGC CTTTGGCCCT CTCTCTCCTG GACAACGCTC TTCCGGCGAT
ATCACTGCTG ACCGCCGCGC TGATTATGCC CGGATGCTCT CGGAAAGCGG CGATCACGCC
GCTGCCGCAG AGCTGATGGA ACAGGCGCTG GAACTCGCCC CGGCCTGGGT GGCGGGGTGG
TTTCTGCTGG GGGAATACCG GGCCAAAGCG GGCTTGATCG AGACGGCAGC GGATGCCTAT
CGGCAGGTGC TGACACTCGA CCCCGAGGAT ATTTTTGCCG CTGGGCTGAA ACTGGTGCTG
ATCGGTGCGC AAGCCATGCC GGAAAAGCCG CCGAGCCGCT ATGTGGCAGC GCTGTTTGAC
GATTATGCCG ACCGCTTCGA CACAGCCCTC GTGGACAAGC TGGACTACCG GGTGCCGAAA
AAGCTGGCGG CGATGATTTC ACGGATTGGT GGTGCGGACC GACGCTATCG CCGCACTGTG
GATTTCGGCT GTGGCACCGG CTTGCTGGGC ATGGAACTGC GGCCATGGGT CGATCACCTT
GAGGGCTACG ATCTATCCTC GGCCATGCTG ACCAAGGCAC GGGAAAAACA GATCTACGAT
GATCTGGCGA TCGCGGATTT GTCGCTTGAT GCGGAGGCCT GCGGTCTGTT TGGTCCCGCA
AAGGGCGAGG GAAGAGGGCG GGCGGATCTG GTCACGGCAG CCGATGTGCT GATGTATCTC
GGCGCATTGT CCGGCGTCTT TTCGCTTGCT GCGGATCTTC TGGAACGGGG CGGCTATTTC
GCCTTTTCCG TCGAAAAACA GCGGGGAGAG GAGAGTTTCA GCCTGGCGCA ATCGCTGCGC
TACCAGCATA GCGAGGCCTA TGTGGTCTGC GAACTGGAAG CCAAAGGCTT TACCCTGCTC
GAAAGCCAGC AGGAGGTCAT TCGCATGGAT GGCGGAAAAC CCATCCAAGG CATTCTGTTT
GTTGCGGCCA AGACGGGCTG A
|
|---|
| Protein sequence | MHGIQPAFGP LSPGQRSSGD ITADRRADYA RMLSESGDHA AAAELMEQAL ELAPAWVAGW
FLLGEYRAKA GLIETAADAY RQVLTLDPED IFAAGLKLVL IGAQAMPEKP PSRYVAALFD
DYADRFDTAL VDKLDYRVPK KLAAMISRIG GADRRYRRTV DFGCGTGLLG MELRPWVDHL
EGYDLSSAML TKAREKQIYD DLAIADLSLD AEACGLFGPA KGEGRGRADL VTAADVLMYL
GALSGVFSLA ADLLERGGYF AFSVEKQRGE ESFSLAQSLR YQHSEAYVVC ELEAKGFTLL
ESQQEVIRMD GGKPIQGILF VAAKTG
|
|---|
| |