| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0552 |
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| Symbol | gguC |
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| ID | 7388958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 469399 |
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| End bp | 470292 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643650187 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548399 |
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| Protein GI | 222147442 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3802] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.44526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC TGAGTGATTT TAATAGGGAC GGTAAACGAT ATGTGGCCCT GAATGGTGTG
GGCGATGATC AAGACCAGAG CATTCTGTTT GATCATGTCA GCAGCTATGA TCTGATCCGT
AGCTTTGTCG ATGCGAATTG TAACTGGAGC CGTGTGCTCG AAAGTCGAAA AAACCAGTGG
AAGCCATCGA TTTTGCCTGA GGCGGATGGA CTGGCTTACA ATCCGCCCGG AAAGCCAGAG
GACATCCGAA ATTGTACCGT CAGTGCCTTT GGCAATACCC ATAAAACCAT CAATAATTCA
CTATCCTCTC AAAAAGACGT GGACTGGTTC TACAAGGGAA ATGGAACAAC AGTGATTGGC
ACAGACCATC CGCTGATCTC CAACCTTAAC TCTTATGGGT GTGGAATCGA AATTGAATAT
GCAGCCGTCT TCATGATCAA CGCAGCGGGC GATCCGGTTT ATATCGGCTA CACGATCGCC
AATGATTTCT CCGACGCCGA GATGCGGCGG CGAATGCCCA GCCTGGCCAA TCTTTCCAAG
CTCGCGACCA CCTCTTTCGG GCGTTTTTTG TTTCTTGCCC CGATCCCGAC AAAGACCGAG
ATTGCCTGCA CCATTTTGCG TCATGGCAAG CCTGCATGGC GTGTCAATGG CCAACTCGGT
TCTGAGGCCA TGAAATACAG CTTCTCCTAT CTGAATGAGC TGCTTTTTCA AAATCAGAGC
ATTAAAGGGG ATGCCTATAC CATTCACTAC ATGCTTTTGG GAGCATCGAT CAGCAGCAAC
AAGGCTGAGT TTGATATGAA ACATTCCGAT ATCATCCTCG TCCATGATGA GGACAATAAT
GTCATTTTGA GAAATGAATA TATCGATGAA GCGATCGTTT GCGCCTGCTG TTGA
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| Protein sequence | MATLSDFNRD GKRYVALNGV GDDQDQSILF DHVSSYDLIR SFVDANCNWS RVLESRKNQW
KPSILPEADG LAYNPPGKPE DIRNCTVSAF GNTHKTINNS LSSQKDVDWF YKGNGTTVIG
TDHPLISNLN SYGCGIEIEY AAVFMINAAG DPVYIGYTIA NDFSDAEMRR RMPSLANLSK
LATTSFGRFL FLAPIPTKTE IACTILRHGK PAWRVNGQLG SEAMKYSFSY LNELLFQNQS
IKGDAYTIHY MLLGASISSN KAEFDMKHSD IILVHDEDNN VILRNEYIDE AIVCACC
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