| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0544 |
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| Symbol | metZ |
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| ID | 7388950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 462735 |
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| End bp | 463919 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650178 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_002548391 |
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| Protein GI | 222147434 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACA ACTGGCGCCC AGCAACCAAA CTCGTTCATG GCGGCACGCT GCGTTCACCT
TATGGCGAAA CATCCGAAGC CATCTATCTC ACCCAGGGCT TCGTCTACGA CAGCTCGGAA
GCGGCAGAAG CCCGTTTCAA GGGCGAGACC GAAGGCTATA TTTACGCCCG CTACGGCAGC
CCGACCAATG ACATGTTCGA AAAGCGCATG TGCCTGCTGG AAGGTGCCGA AGAGGGCCGC
GCCATGGCTT CCGGCATGGC CGCCGTCGCG GCCTCCATTC TCTGCCAGGT TCAGGCTGGC
GATCATATTG TCGCTGCCCG CGCCCTGTTC GGCTCCTGCC GCTGGGTGAT CGAGACCTTG
GCACCCAAAT ATGGCGTGGA TTTCACCCTG GTCGATGGCC GCGACCTGAA AAATTGGGAA
GACGCCATCC GCCCGAATAC CAGGGTGTTT TTCCTGGAAA GCCCCACCAA TCCTACCCTG
GAAGTGGTGG ATATTGCCGG CGTCGCCAAG CTCGCCAACC AGGTCGGCGC GACCGTGGTG
GTCGACAATG TTTTCGCCAC CCCGCTCTTT CAAAATCCGC TGGAACTTGG CGCCCATGTC
GTTGTCTATT CGGCAACCAA GCATATCGAC GGCCAGGGCC GCTGCCTGGG CGGCATCGTG
CTGTCGTCCA AGCAATGGAT CGAGGAAAAG CTCCAGGATT ACTTCCGCCA TACCGGTCCG
GCCATGTCTC CCTTCAACGC CTGGACCCTA TTGAAAGGCG TGGAAACCCT GCCGCTGCGC
GTCAAGCAGC AGACGGAAAA TGCCGGTCGT ATCGCCGATT TTCTGGCTGA CAATAACAAG
GTTGCCCGCG TTATCTATCC AGGCCGCGCC GACCATCCGC AGGCCGACAT CGTCGCCAAG
CAGATGAAGG GCGGCTCCAC CCTGGTGGCT TTTGAAATGA AGGGCGGTAA GGCGGCGGCT
TTTGCCCTGC AAAACGCCCT ACAAGTGGTG AAGATCTCCA ACAATCTCGG CGACGCCAAG
AGCCTGATCA CTCACCCGGC CACCACCACC CACAAGAACC TGACGGACGA GGCCCGTGCA
ACGCTTGGCA TGTCCGGCGG CACATTGCGC CTGTCCTGCG GTATTGAAGA TGCCGAAGAC
CTGGTGGAGG ACTTCGCTCA GGCGCTGGAT GCCGTTTCCG CCTGA
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| Protein sequence | MANNWRPATK LVHGGTLRSP YGETSEAIYL TQGFVYDSSE AAEARFKGET EGYIYARYGS
PTNDMFEKRM CLLEGAEEGR AMASGMAAVA ASILCQVQAG DHIVAARALF GSCRWVIETL
APKYGVDFTL VDGRDLKNWE DAIRPNTRVF FLESPTNPTL EVVDIAGVAK LANQVGATVV
VDNVFATPLF QNPLELGAHV VVYSATKHID GQGRCLGGIV LSSKQWIEEK LQDYFRHTGP
AMSPFNAWTL LKGVETLPLR VKQQTENAGR IADFLADNNK VARVIYPGRA DHPQADIVAK
QMKGGSTLVA FEMKGGKAAA FALQNALQVV KISNNLGDAK SLITHPATTT HKNLTDEARA
TLGMSGGTLR LSCGIEDAED LVEDFAQALD AVSA
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