Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0534 |
Symbol | pgi |
ID | 7388940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 451611 |
End bp | 453236 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650168 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_002548381 |
Protein GI | 222147424 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCTA TCGTCGAACA GCTGAAGTCC ACCGTCGCGG CCACCGCCGC CACTGATATT CGCGGCGCTT TTGCAAGCGA TCCCAAACGT TTCGAGCGGT TTTCCAGTCG CTTTGACGAC CTGCTGATGG ATTACTCCAA ATGCGCCGTC AATGACGAGA TCATGGCCCT GCTGGAGACG CTCTGCACGC AAGCTGGCGT AGCTGAAAAG CGCGAAGCGA TGTTCAACGG TGAGGCCATC AACTTTACCG AAGGCCGCGC CGTCTTGCAT ACGGCACTGC GCAACCGGGC CAACACGCCT GTCGTAGTCG ATGGCAAGAA CGTCATGCCC GATGTCAACG CCGTGTTGCA CGCCATGTCG GCTTTCGCGG AAGGCTTGCG TCAGGGTACG ATCACCGGTT CGACGGGCCT CCAGATCACC GATGTGGTCA ATATTGGCAT TGGCGGTTCG GATCTCGGCC CCGCCATGGC AACGCTGGCG CTGGCACCAT TTCACGACGG CCCTCGCCTG CATTTCGTCT CCAATGTCGA TGGCGCCCAT ATCGCCGATA CGCTGAAACT GCTGGAGCCG GAAACCACGC TGTTCATCGT TGCCTCCAAG ACCTTCACCA CCATCGAGAC CATGACCAAT GCCGCAACGG CGCGGGCCTT CATTGCCTCG GCGCTGGGTG AAGATGCCGT CGGCGATCAC TTTGCCGCCG TCTCGACCGC GCTTGAAAAA GTCGCGGCCT TCGGCATCGG TTCCGATCGG GTGTTCGGCT TCTGGGATTG GGTCGGTGGA CGCTATTCCA TCTGGTCGGC CATCGGCCTG CCGCTGATGA TTGCTGTCGG CGCCGATAAT TTCGTGGAAT TCCTGGCCGG CGCCCATGCC ATGGATATGC ATTTCCGCAC CGCGCCTTTT CGGGAAAACC TGCCGATGCT GCTGGGCGCT ATCGGCTATC ACCATCGCAA CGTCCTGGAT TACCCAACCC GAGCCATCCT GCCCTACGAT CAGCGCCTGT CACGCTTCCC GGCCTATCTC CAGCAGCTTG ACATGGAATC GAACGGCAAG GGCGTGACCA TCGATGGCAG CCCGGTCAAG GGCAATTCCG GGCCGGTGGT CTGGGGCGAA CCCGGCACCA ATGGCCAGCA CGCTTTCTAC CAGCTGATCC ACCAGGGTAC GAGCGTGATC CCAGCCGAGT TTATGATCGC TGCCAAGGGC TTCGAGCCGG AATTGCGCCA TCAGCACGAC TTGCTGATCG CCAATTGCCT GGCCCAATCG GCAGCCCTGA TGAAGGGACG CACGCTGGAT GAGGCCAAGG GCCAGCTGCT GAAATCCGGT ATGGACCAGG CCAAGGCCGA TCATATCGCC CCGCACCGGG TCTTTACCGG CAACCGTCCG TCGATCACAT TCGTCTATGA ACAATTGACC CCTTTTGCGC TCGGACGGCT GATCGCGCTT TACGAACACC GGGTGTTTGT CGAAGGCGTG CTGTTCGGCA TCAATTCCTT CGATCAATGG GGCGTGGAAC TGGGCAAGGA ACTGGCAACC GGCCTGCTGC CGGTGGTGCA GGGCAAGGCC GGGACAGATG GGCAGGATGC GTCGACGGCA GGACTGGTGG CTGCCTTGAG CGATCTGGGT CGATAA
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Protein sequence | MHAIVEQLKS TVAATAATDI RGAFASDPKR FERFSSRFDD LLMDYSKCAV NDEIMALLET LCTQAGVAEK REAMFNGEAI NFTEGRAVLH TALRNRANTP VVVDGKNVMP DVNAVLHAMS AFAEGLRQGT ITGSTGLQIT DVVNIGIGGS DLGPAMATLA LAPFHDGPRL HFVSNVDGAH IADTLKLLEP ETTLFIVASK TFTTIETMTN AATARAFIAS ALGEDAVGDH FAAVSTALEK VAAFGIGSDR VFGFWDWVGG RYSIWSAIGL PLMIAVGADN FVEFLAGAHA MDMHFRTAPF RENLPMLLGA IGYHHRNVLD YPTRAILPYD QRLSRFPAYL QQLDMESNGK GVTIDGSPVK GNSGPVVWGE PGTNGQHAFY QLIHQGTSVI PAEFMIAAKG FEPELRHQHD LLIANCLAQS AALMKGRTLD EAKGQLLKSG MDQAKADHIA PHRVFTGNRP SITFVYEQLT PFALGRLIAL YEHRVFVEGV LFGINSFDQW GVELGKELAT GLLPVVQGKA GTDGQDASTA GLVAALSDLG R
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