| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0528 |
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| Symbol | pyrE |
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| ID | 7388937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 449446 |
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| End bp | 450138 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650165 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_002548378 |
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| Protein GI | 222147421 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CTTCCTTTTC CGATCCGGCC GTCATGGCGG AGTTGCTGGC GAAAATGCTC
TGGGAAATCA AGGCGGTGCA TTTCAATGCC GCTGAGCCTT ACAAGCTGGC TTCCGGGATG
CGCAGCCCCG TCTATATCGA TTGCCGCAAG CTTCTGTCCT ATCCGCGTGT CCGTTCTGCC
GTGATGGATT TTGCGGTTGC CACGCTGCTG CGCAATGCCG GTTTCGAGCA ATTCGACTGT
ATTGCCGGTG GCGAGACGGC GGGCATTCCC TTTGCCGCTC TGTTGGCCGA TCGGCTGGCG
CTGCCAATGA TCTATGTGCG CAAGCAGCCC AAGGGCCATG GCCGCAACGC CCAGATCGAG
GGTCATATGC CTGACGGTGC CAGGGTGCTT GTCATCGAAG ACCTGACGAC GGCAGGCGGC
AGCATGTTTA CCTTTATCGA TGCCGTGCGG GCCGCTGGCG GTGTGGTTGA TCACGGTATC
GCTTTGTTCT TCTACGGAAT CTTCCCGCAA GCCCATCAGC GTTTCGAAAA CGGCAACGTC
AAACTTCATT ATATCGCCAC CTGGCGCAAT GTTCTGGCCG TGGCCCGCGA CCAGAAACTG
TTTGATGACA AAACCTTGTC GGAAGTGGAA TCCTTCCTGG ATGCCCCACT CGAATGGTCC
GGTCGCAATG GCGGGGTCAG CACGCTGGGT TGA
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| Protein sequence | MTQTSFSDPA VMAELLAKML WEIKAVHFNA AEPYKLASGM RSPVYIDCRK LLSYPRVRSA
VMDFAVATLL RNAGFEQFDC IAGGETAGIP FAALLADRLA LPMIYVRKQP KGHGRNAQIE
GHMPDGARVL VIEDLTTAGG SMFTFIDAVR AAGGVVDHGI ALFFYGIFPQ AHQRFENGNV
KLHYIATWRN VLAVARDQKL FDDKTLSEVE SFLDAPLEWS GRNGGVSTLG
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