| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0524 |
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| Symbol | pyrC |
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| ID | 7388935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 446740 |
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| End bp | 447792 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650163 |
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| Product | dihydroorotase |
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| Protein accession | YP_002548376 |
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| Protein GI | 222147419 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCGC TTACCATTCG CCGCCCCGAT GACTGGCATC TACATCTCCG CGACGGCGCC
ATGCTGGAAG GTGTGATCGG CGATACCAGC CGGCACTTCG CCCGCGCCAT CATCATGCCC
AATCTCGTGC CGCCGGTGGT GACGACAGCG GATGCAGAGG CTTATCGGCA GCGCATTCTG
GCCGCCGTGC CGAAGGGCGA TCGCTTCGAG CCACTGATGA CCCTGTATCT GACCGAGCAG
ACCAGCCCTG ATGATGTTGA GGAGGGCAAG ACAACCGGAC TGATCACCGC GGTGAAGCTC
TATCCAGCCG GTGCCACCAC CAATTCTCAT GGCGGCGTGC GCGATCTCGA CAAGGCGATG
CCCGTTCTGG AGCGGATGGC GAAAATCGGA TTGCCGCTCT GTGTCCATGG AGAAGTCACG
ACGCCGGAGG TGGATATTTT CGACCGTGAG GCGGTGTTCA TCGACACGGT GCTGGACCCG
TTGCGCCGCC GTCTACCGGA GTTGAAGGTG ACGATGGAGC ATGTCACCAC ATCCGACGGG
ATCGATTATA TCCTCAGTGC CGATAGCAAT CTGGCTGGCT CGATTACCAC CCATCATCTG
ATCATCAACC GCAATGCCAT TCTGGTTGGT GGCATCAGGC CGCATTATTA TTGCCTGCCG
GTTGCCAAGC GCGAAAGCCA TCGCCTTGCC TTGCGCCGCG CTGCGACCTC GGGTGACAGC
CGGTTTTTCC TTGGCACGGA TTCAGCCCCG CATGTCGATC CTTTGAAGGA ATGCGGTTGC
GGCTGCGCGG GCATTTATAC ATCCATCAAC ACAATGAGCT GCCTTGCCCA TGTGTTTGAA
GAGGACGAGG CCCTGGAGCG GTTGGAAGCC TTTGTCTCGC TCAACGGTCC GGCCTGGTAT
GGGCTTCAAC CAAACGACGA GATGATAACT CTGGTCAGAC GTGACGCACC GGTCGCCTTT
CCGGCAAAGA TCGAAACGGG TGCGGGACCC GTCACCGTTT TCGACCCGAT GTTTCCAATC
CATTGGGACG TCGAGGCCGC AATACAGGCT TGA
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| Protein sequence | MRSLTIRRPD DWHLHLRDGA MLEGVIGDTS RHFARAIIMP NLVPPVVTTA DAEAYRQRIL
AAVPKGDRFE PLMTLYLTEQ TSPDDVEEGK TTGLITAVKL YPAGATTNSH GGVRDLDKAM
PVLERMAKIG LPLCVHGEVT TPEVDIFDRE AVFIDTVLDP LRRRLPELKV TMEHVTTSDG
IDYILSADSN LAGSITTHHL IINRNAILVG GIRPHYYCLP VAKRESHRLA LRRAATSGDS
RFFLGTDSAP HVDPLKECGC GCAGIYTSIN TMSCLAHVFE EDEALERLEA FVSLNGPAWY
GLQPNDEMIT LVRRDAPVAF PAKIETGAGP VTVFDPMFPI HWDVEAAIQA
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