| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0519 |
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| Symbol | |
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| ID | 7388930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 441222 |
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| End bp | 441962 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650158 |
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| Product | Fnr-like transcriptional activator |
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| Protein accession | YP_002548371 |
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| Protein GI | 222147414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGC AAGATACTGC TGATACTGGC ATGGCAGATA TGGACATGAC AGATACGGGC
ATGTTTCTGG CCAAGGCGGA TATTTTCGCC AGCCTGACAC CGGAAGAAGA TAGGGCGTGG
TCGCAGCTCT GCACCGTTGA GAGCGTTTCG GGTGGCACGA TTGTCCTCGA TTATGGCATC
AGGCCCGAAA TTGTGCTCGT CGTCCTGTCC GGCGCTCTGC GTGCCACGTT GCGTGTTTCA
GCCGGAAAGG AGTTATTTCT GGATATGATC GGCCCCGGCG GCACTATGGC AGAAATGGAT
GCGATACGCG CTGAAGGCTA TAATCTCTGT CTGATGGCCA CCACCGATGC GACGCTGGTT
CGAATGCCAG TGGACGTCTT CAATGACATT ATCGCTCAAA AACACACCGT CTGTCTGAGC
CTTCTGTCCG TATTGGTCCA GCGCATGCAC GTCCTGCATG CCAGAATATG CGAGTTTTCC
TATCTCGATG TCCGGCACCG CCTTTACACA ACCTTGCTAC GATTGTCGAA ACCCTCTGAG
GACAAGCCTC AGCAGCGCAC GATCTCTCCG GTGATTATTC ACGCGGCCTT AGCCGAACAT
GTTGGCGCAC GCCGCGAAAC CGTCTCACGC GAGATGTCGC GTCTGGTGCA GGATGGGGTG
ATCGAACGCA ACCGTAATGC GATTGTCATC CGTCAGCCCC ATGAGTTATT GCGGCGCCTG
TCGCAATTCG ATTTTGCATG A
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| Protein sequence | MTSQDTADTG MADMDMTDTG MFLAKADIFA SLTPEEDRAW SQLCTVESVS GGTIVLDYGI
RPEIVLVVLS GALRATLRVS AGKELFLDMI GPGGTMAEMD AIRAEGYNLC LMATTDATLV
RMPVDVFNDI IAQKHTVCLS LLSVLVQRMH VLHARICEFS YLDVRHRLYT TLLRLSKPSE
DKPQQRTISP VIIHAALAEH VGARRETVSR EMSRLVQDGV IERNRNAIVI RQPHELLRRL
SQFDFA
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