| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0512 |
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| Symbol | |
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| ID | 7388924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 433595 |
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| End bp | 434458 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650152 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548365 |
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| Protein GI | 222147408 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.440355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATC TCGATAGCGA CGCACTGGCA AGCTTTGTAG CTGTTGCCGA GACGGGCAGT
TTCACGGCGG CGGCAGAACG GCTGGGACGC ACGCAGGCCG CGGTCAGCAT GGCGATCGGC
AAATGGGAGG AGCGTCTTGA TCTGCGATTG TTTGATCGCG GGCATCGCCG GGTGACATTG
ACGCCGATCG GGGAAAGATT GCTTGGCTAC GCGCGGCGCA TACGGGCAAT CGAGGATGAA
GCCCTGGCCA CGCTGCTTGA AGGTCGCAAT GAAAGCCGCG TTCGGCTCGG CATGCCCGAT
GACTACCTGA CACTGTTCGG TACGGCGCTG ATGCAGCGTT TTGCGCCACA GCATCCCAAG
GTCAATCTGG ACCTACAATA TGATTTCTCT CACCATCTGG AAGGCATGGT TGAAAGCCGG
GAGCTGGATA TTGCCATCAT CACGCAAAGT CCGGCAGAGC CTAAGGGGGA GTTGATCCGC
CTGGAACGGC AGGTTTGGTG CGCGGCGCCA AACCGTTACC CGGAACACAG CAGTACCATT
CAACTGGCGC TTTTTCCGGA CGGCTGCCGG TCCCGGCCAC AGGTTCTGGC AGCGCTCGAC
CGTGCGGATC GCCGTTGGCG GATTGTCTAT TCGTCATCGG ACATTGCTGG AATTCAGCTG
GCGGTTCATT CAGGAGACTT GTTGACGGTT CTGCCTGAGA CGGCAGTGCC TGCGAACTGG
CGCAAGCTGG GGATGGATGA TGGCCTGCCG GAACTGCCGA TCCTGCGGCT GGCAATGGTT
CTGCCCCAAC AGCCGCGCCT GCCGGTCAGG CAATTGGCGA CGTTCCTGCG TGCAGAATTC
CAGCATTCTC TTTCTACCGC ATAA
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| Protein sequence | MRNLDSDALA SFVAVAETGS FTAAAERLGR TQAAVSMAIG KWEERLDLRL FDRGHRRVTL
TPIGERLLGY ARRIRAIEDE ALATLLEGRN ESRVRLGMPD DYLTLFGTAL MQRFAPQHPK
VNLDLQYDFS HHLEGMVESR ELDIAIITQS PAEPKGELIR LERQVWCAAP NRYPEHSSTI
QLALFPDGCR SRPQVLAALD RADRRWRIVY SSSDIAGIQL AVHSGDLLTV LPETAVPANW
RKLGMDDGLP ELPILRLAMV LPQQPRLPVR QLATFLRAEF QHSLSTA
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