| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0500 |
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| Symbol | |
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| ID | 7388494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 421269 |
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| End bp | 422234 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650139 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548353 |
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| Protein GI | 222147396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCTTC CAGATATCTT GTCTCGTCAC CTCAGACTTC CGGTGATTGC ATCGCCTTTG
TTCATTATTT CGCATCCGCG TCTGACATTG GCGCAGTGCA AGGCGGGTGT GGTTGGCGCC
TTTCCGGCGT TGAACGCCCG GCCGGAAGCG CAGTTGGACG AGTGGCTGGA TGAGATTACC
CAGGAGCTTG CCGCCCATGA CCGCGCCCAT CCCGAGCGTC CGGCTGCGCC GTTCGCCGTC
AACCAGATCG TCCACGGCTC CAACAAACGG CTGGAGCACG ACCTGGGCAT GTGCGTCAAA
TACAAAGTGC CGATCGTCAT CTCTTCGCTG GGCGCCGTGC CGGAGGTGAA TGCTGCTATC
CATTCTTACG GCGGTATCGT GTTGCATGAC GTGATCAACA ACCGCCATGC CCATTCGGCG
ATCCGCAAGG GCGCCGATGG CCTGATCGCG GTTGCCGCAG GGGCTGGTGG CCATGCGGGA
ACGCTGTCAC CCTTTGCGCT CCTGCAGGAA ATCCGGGAAT GGTTCGATGG GCCGCTGCTG
CTTGCCGGTT CGATCTCGAC CGGCGGCGCC ATTCTTGCCG CTCAAGCAGC CGGTGCCGAC
ATGGCCTATA TCGGTTCGCC CTTCATTGCC ACGCAAGAGG CGCGGGCGCC GGATGCCTAC
AAGCAGGCTC TCGTTGAGGC CAGCGCCACC GATATCGTCT ACTCTAACTA TTTTACCGGT
ATTCACGGCA ATTACCTGCG CTCATCCATT GTTGCCTCGG GCCTGGACCC GGACAAATTG
CCGGAAGCCG ATCCCAGCAA GATGGATTTC GGCAGCGCCG TCACCGGCGC CAAAGCGTGG
AAAGACATCT GGGGCTGCGG GCAAGGCATC GGTGCCATCA AGGCCGTGGA ACCCGTTGCC
GCGCTGGTCG ATCGATTGGA CACGGAATAT CGCGCCGCCC GAGACAGGAT CTGCGGAAAA
GTGTAA
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| Protein sequence | MALPDILSRH LRLPVIASPL FIISHPRLTL AQCKAGVVGA FPALNARPEA QLDEWLDEIT
QELAAHDRAH PERPAAPFAV NQIVHGSNKR LEHDLGMCVK YKVPIVISSL GAVPEVNAAI
HSYGGIVLHD VINNRHAHSA IRKGADGLIA VAAGAGGHAG TLSPFALLQE IREWFDGPLL
LAGSISTGGA ILAAQAAGAD MAYIGSPFIA TQEARAPDAY KQALVEASAT DIVYSNYFTG
IHGNYLRSSI VASGLDPDKL PEADPSKMDF GSAVTGAKAW KDIWGCGQGI GAIKAVEPVA
ALVDRLDTEY RAARDRICGK V
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