| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0499 |
|---|
| Symbol | |
|---|
| ID | 7388493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 419688 |
|---|
| End bp | 420977 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643650138 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548352 |
|---|
| Protein GI | 222147395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.797463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGG AAAGGTCTCG CGTGAGCGGA TTGGAAACGG CCATCAGAAG CGCCCTCGAC
CGGTCGGAGC GATCGCGGGC TGAAGTTCGG GCCAGAATTT ACCAGTCTGC GCGCCAGGCT
CTGGAAGCAG GCCTCAAGAA GCAGAATGTC AATGATCCGG AGACCGTGGC CGAGCAGCGC
CATCGGCTGG AAGCGACCAT TCATGCGATC GAGCAGCAGG AGCGGGCACG GCTGAAAGCT
GAAGCCGCCG TTGAGCCTGT GTCACGCGCT CCGGTTCCGC CGCCCACGTC GCCACCTCTC
TCGACATCAA CGCCGCCAAG AGGTCCCGCG CCATCGGTCT CAGCCGATGC GAACGCTCCC
GGCGACGATT CAGCCTCGCT GTCCTTCGGC GTCGATCGGG ATCACGGGCG GCCTGCCGAA
CCAAGCCTCG ACCTTGATGA TGTCCGGGCC GAACGGCATG ACCGGGCGGA TCCGGCAGGC
ATGTCGAGTT TTGCTTCGTT TTCGGCCCGG CCAAAGAGTG CAGAGCCAGA GAGCGCGGAA
GACGAGTATG ACGAGGAGCC TGTCCGTGGC ATGCGGGCGG AGCCCGTTGC AAAGCCACGC
CGTCGCCGGG GCGTCCTGTC GCGCTTGCTG ATTTCCGTCA CCCTTCTGTC TTCCATCGGC
ATTGCGGCCT GGTGGGTCTA TTCCACCGGC CTGTTGCTGT CTCCTGACCA GCGGCAGACG
GGCGCGCCCT CACCGACGCC GACTGTGTCG TCGGAAGACT TCAATGGCGA CCAGCCCACC
GATCAATCCG GCGGCGAAGC GGCAAACGAG CCAAAGACAA TCGATCCGCA ACGCGGTTTT
TCCAATGATT GGATAGAGGC CTTCCAGCCC GGCGACGCCT CGAAAATCAA GGCAAGGCCA
AATGCCACGG CGGATGTAGT CGGCGCCAGC GATGGCCAGG CTGTTCATAT CGTTTCACGC
AGCACCGACA TGGATGGGAC GGCCGCCATC GAAATCGCGC CTGACCTGTT GCGGCAAATG
GCTGGAGGAA CCTCGACCAT TGCCCTGACT GTACAGTCTT TTGGTGAAAA ACCGGTTCAG
TTCTCGCTGA GTTGCGCATT CGATCGTCTG GGCGACTGCG CCCGTCACAG ATTCACAGCC
AATCCGGAAA AAGCCGACCT GTTGTTTCGA GTGACCCTGC CGAACGGCAT CGCTCCCAAC
GCGCCTGGGC AGCTTCTGAT CAACGCCGAT ATCAGCGGTC AGGGCAATGG CATCAATCTT
TACGCGGTGC GTGTTCTTCC CGGCAAGTGA
|
|---|
| Protein sequence | MNVERSRVSG LETAIRSALD RSERSRAEVR ARIYQSARQA LEAGLKKQNV NDPETVAEQR
HRLEATIHAI EQQERARLKA EAAVEPVSRA PVPPPTSPPL STSTPPRGPA PSVSADANAP
GDDSASLSFG VDRDHGRPAE PSLDLDDVRA ERHDRADPAG MSSFASFSAR PKSAEPESAE
DEYDEEPVRG MRAEPVAKPR RRRGVLSRLL ISVTLLSSIG IAAWWVYSTG LLLSPDQRQT
GAPSPTPTVS SEDFNGDQPT DQSGGEAANE PKTIDPQRGF SNDWIEAFQP GDASKIKARP
NATADVVGAS DGQAVHIVSR STDMDGTAAI EIAPDLLRQM AGGTSTIALT VQSFGEKPVQ
FSLSCAFDRL GDCARHRFTA NPEKADLLFR VTLPNGIAPN APGQLLINAD ISGQGNGINL
YAVRVLPGK
|
|---|
| |