| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0493 |
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| Symbol | pstC |
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| ID | 7388489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 414393 |
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| End bp | 415880 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650134 |
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| Product | phosphate ABC transporter permease protein |
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| Protein accession | YP_002548348 |
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| Protein GI | 222147391 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
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| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.183402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGT CAATCCTAAT TTTTATCGTC ATAGCTATCG GGATCATCGG CTATCTGCTG
GGCTCGTCAC GGGCACAGTC GCTCGCGCAA GGCCGCGCGT CTGCCCTGCA TTCCCGCTAT
GGCTATCATG GCAGTTTTGT TTCTATTCTG GCAGTTGTAC CCGCCTTCCT GGTGCTGGGC
CTCTGGATGG CGATTGCGCC ATCGCTGATC GAAACGCGTG TACGCGATGC GATGCCCGAT
GCGGTCAAGG CGCAGGCAGG AGCCACCCAG AACCTCAATT ACGGCACCAT CGGTGCAATC
GCTCGTGGCT TGAAAAGCCT TGACGACGAC CAATTGGCCA AGTTGAAAAG CGCAGATGCC
ACGACTGCCC GCACAATGCT GGCCGAACAA GGCGTACCGC TGGCCGGCGA GCCTGAGCCC
TACATGATCG TGGCGGCGGA GGCCTTGAAC GGCATGCGCG CCATCAACGA TCTGGCGCTG
ACCATCGTGG TAATCGCCAC CTCGCTCGCA GGCGCCCTGT TCGGGCTTCG GTTGATCGCG
CCACGCTTTC GCGCCCGCAA TCGGGTGGAG CAAGCCATTC AGGCAGCCTT GGTCATCTGC
TCTTCCATCG CCATCTTGAC GACAGTCGGC ATCATCATGT CGATGCTGAC GGAAGCCACC
CACTTCTTCC GGGAGGTTCC GGCCTGGCGG TTCTTCTTCG GCACGGTCTG GGATCCTCGC
TTTGCCGCTG CTGGCGCCAC CGATACCGGC GGCCAGTTCG GATTGATCCC GCTTCTGCTC
GGCACACTCT ATATCGGCGT GGTCGCCATG CTGTTTGCCG TGCCCGTCGG TCTGTTTGCT
GCCATCTACA TGGCCGAATA TGCCTCGCCA CGGCTGCGCT CGATCACCAA GCCACTGCTG
GAAGTGCTGG CCGGTATTCC GACCATCGTC TACGGCTTCT TCGCGCTGAC CTCGGTCGGT
CCGTTCCTGC GGGATATCTC CGCCAAGATC AACGGCATCG CCACCGGCGA TTTCGTCAGC
TTCATCCAGG CACAGAGCGT GCTGACGGCA GGCTTCGTGA TGGGGATCAT GCTGATCCCC
TATGTCTCCT CCCTGTCGGA CGACATCATC ACTGCCGTGC CGCGCTCGCT TCGGGATGGT
TCGCTTGGCC TGGGTGCCAC ACGGTCTGAA ACCGTCAAGC GGGTGATCCT GCCGGCAGCA
CTTCCGGGTA TTGTCGGCGC GCTGCTGATG ACGGCATCGC GTGCTATCGG CGAAACCATG
ATCGTGGTGC TGGCCGCAGG CGTTGCGGCA CGTATTCAGC TCAATCCTTT CGAGCCGATG
ACAACAGTCA CCGTTAAGAT CGTCAACCAG CTGACCGGCG ACCTTGAATT TACCTCTCCG
CAAACGCTGG TGGCCTTCGC ACTGGGTATT ACCCTTTTTG CCATCACGCT TTGCCTTAAT
ATCTATGCGC TTTACATCGT GCGCAAATAC CGGGAGCAGT ACGAATGA
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| Protein sequence | MSTSILIFIV IAIGIIGYLL GSSRAQSLAQ GRASALHSRY GYHGSFVSIL AVVPAFLVLG
LWMAIAPSLI ETRVRDAMPD AVKAQAGATQ NLNYGTIGAI ARGLKSLDDD QLAKLKSADA
TTARTMLAEQ GVPLAGEPEP YMIVAAEALN GMRAINDLAL TIVVIATSLA GALFGLRLIA
PRFRARNRVE QAIQAALVIC SSIAILTTVG IIMSMLTEAT HFFREVPAWR FFFGTVWDPR
FAAAGATDTG GQFGLIPLLL GTLYIGVVAM LFAVPVGLFA AIYMAEYASP RLRSITKPLL
EVLAGIPTIV YGFFALTSVG PFLRDISAKI NGIATGDFVS FIQAQSVLTA GFVMGIMLIP
YVSSLSDDII TAVPRSLRDG SLGLGATRSE TVKRVILPAA LPGIVGALLM TASRAIGETM
IVVLAAGVAA RIQLNPFEPM TTVTVKIVNQ LTGDLEFTSP QTLVAFALGI TLFAITLCLN
IYALYIVRKY REQYE
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