| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0477 |
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| Symbol | |
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| ID | 7388479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 404706 |
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| End bp | 405830 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650124 |
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| Product | hydroxypyruvate reductase |
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| Protein accession | YP_002548338 |
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| Protein GI | 222147381 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2379] Putative glycerate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.34998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCGG CCTTGGAGAC GCTGTGGGAC GGCCCGCTGG AAGGTGTTGT CGTTACTCGA
TACGGCTATG GCTGCCCGCT CGCCCGTTTG GAATTGCTCG AAGCGGCGCA TCCGGTGCCC
GATGCCAATG GTCTCGCCGC GGCTGAACGG CTGAAACACC TCGTTGCCCC GCTTGGTCCC
GATGATCTGG TGATTGCCTT GATCTGCGGC GGCGGCTCGG CGCTGCTGCC CGCTCCGCCC
GCCGGGATGA CGCTGGAAGA CGAGATCGAC CTCAACAGGC AATTGCTGGC CTGCGGTGCG
CCGATCAGCG CGATGAACGT GGTGCGCAAA CACCTGTCCA CGATCAAGGG CGGAAGGCTA
GCCGCCTTGA CCAAAGCGCC CGTCGTCAGT CTGATCGTTT CCGATATTCC CGGCGACAAT
CCGGCGCATG TTGCTTCCGG CCCGACCGTG CCGGATGCCT CGACCCGTCA CCAGGCGCTA
GAGATTGTTC GCGCCTATGG TTTGCGACTG CCACAGGCGG CATTGGACCA CCTGAATTCT
CCAGGCTCCG ATGCGCCCCG GCCAGACGAT CCAGCCTTTG CGCGCAACCG GCATCATGTC
ATCGCGTCAG CCAGCGTCTC GCTGGAGGCC GCAGCGCTGG CCGCTGAAGC GGCTGGCGTG
CGCGCTGCAA TCCTGTCCGA CAGTATCGAG GGGGAGGCGC GTGATGTGGC TGGCGTTCAT
GCCGCGCTGG CCCGTGAAAT CGCGGCTAAG GATCGGCCAT TTCCCAAGCC GGTCGTCTTG
CTGTCCGGCG GCGAAACCAC GGTCACCATC AAAAACCAAG GAACGCAGGC CACAGGACGC
GGTGGGCGCA ACAGCGCTTT CGCGCTGGCC ATGGCGCTGG GCATTGCTGG TCACGATATC
GAGGTGCTTG CCGCCGATAC CGATGGCATT GATGGCACGG AAAACAATGC CGGTGCCTTT
GCCGATGGCA CCAGCATTGT CAGGTTAAAA CAACAGGGTC TGGATGGCGC GGCCCTGCTT
GATGCCCATG ACAGCTATAG CGCCTTTGAA GCGCTGGGCG ACCTGTTTGA AACCGGCCCG
ACTGGCACCA ATGTCAATGA TTTCAGGGCA ATCCTGATCC GTTGA
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| Protein sequence | MAAALETLWD GPLEGVVVTR YGYGCPLARL ELLEAAHPVP DANGLAAAER LKHLVAPLGP
DDLVIALICG GGSALLPAPP AGMTLEDEID LNRQLLACGA PISAMNVVRK HLSTIKGGRL
AALTKAPVVS LIVSDIPGDN PAHVASGPTV PDASTRHQAL EIVRAYGLRL PQAALDHLNS
PGSDAPRPDD PAFARNRHHV IASASVSLEA AALAAEAAGV RAAILSDSIE GEARDVAGVH
AALAREIAAK DRPFPKPVVL LSGGETTVTI KNQGTQATGR GGRNSAFALA MALGIAGHDI
EVLAADTDGI DGTENNAGAF ADGTSIVRLK QQGLDGAALL DAHDSYSAFE ALGDLFETGP
TGTNVNDFRA ILIR
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