| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0453 |
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| Symbol | |
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| ID | 7387185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 387323 |
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| End bp | 388747 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650108 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548322 |
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| Protein GI | 222147365 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.156809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCC GGTTGCGCGG GCTTTCCGGC AAGCTGCTGG TGTTGACCGT CATTTTCGTC
CTTGCGGCGC AGGTGCTGAT TTTTGCTCCG TCGATTGCCA CGATGCGCCT CAATTGGCTG
AAAAACCACA TCAACAAGGC CGCGGCCGCC GCAGTGGTGA TTGATGGGCT ACAGCCGCCT
GAACTTCCCA AGGATGTCCA GGCCGACACC CTGCTTGCTA CCGGAACCAA GGCGATTGCG
CTCACCAAGG ATGGCACGAC GCGGCTGCTG GCCATGGCGG ACATGCCACA AGAAGTGGAT
GGTCAATATG ACATTTCCGA TGTGGGAACA TTGACCGCCA TCAAGGACGC AGTCGACACC
CTGCTATTCG GCGGCAATAG ACTGATCAGC GTTTCCGGCC CGATCGGCGA CACGTCGATG
CGAGTGGAAG TGGTGATGTC CGATGCGCCT CTGCATCGCG GACTATTGGC TTATGCAACG
CGCATTGCCG TCGTGTCGTT GATCATTTCG GTGATCACCG GCCTCCTGCT GTTCGTGACG
CTGAATCGGA TGCTCATCAA TCCGATTCGG CGACTGAGCC GCAATATACA GGCGTTTGCC
AGCGACCCGG AAAATCCTGA TAGGGTCATG GAGGTGATCA GTGGTCGCGA CGAATTGGCC
TTTGTCGCCC GCCATCTGGC CACGATGCAG GAGGATCTGC AAAAGACCCT GAGGCAGCAG
AAAAGCCTGG CCGATCTCGG CCTTGCCGTT TCCAAGATCA ATCATGACAT GCGCAATATC
CTTGCCTCTG CCCAGTTGAT GTCCGATCGG TTGGTGGATG TCGACGATCC CATGGTGAAG
AGCTTTGCGC CTAAACTGGT CCGCACGATC GACCGAGCCG TGGGCTATAC GAGTGAAGTG
CTTGCCTATG GACAGGCTTC GGAAGCCGAA CCCCGCCGGC GCCGATTTGT GCTTTCCACG
CTCAGCCAGG AAGTTCAGGA TATCCTTGCC CTGGACAAGG GCATCGACTT TGTCGATCAG
ATTTCACCCG ACATCGAAAT CGACGCCGAC AGCGAACAAT TGTTCCGTGT CATTCATAAT
CTCTGCCGCA ATGCTGCCCA GGCGCTTTCA TCCGCCATGA CGGAAATGAC CACCGCAACA
CCCCGCATCT TGCTATCGGC TCACCGCATC GGCAGCGTTG TTGCAATCAC CGTTGACGAC
AACGGCCCTG GCCTGCCGCG CAAGGCCCGC GAAAACCTGT TCACACCGTT TCGCGGCTCA
GCCAGATCGG GCGGCACGGG CCTTGGCCTG GCCATCGCCC GCGAAATCGT GCTGGCGCAT
GGGGGAACGA TCGCGCTTAT GGAAAAACCC TCCTCCGGCA CACAGTTCCG GATCGAAATT
CCAGACAGGC CGGTGGCGCT CGACACCTTC CGGCTTCGAG CATAA
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| Protein sequence | MPSRLRGLSG KLLVLTVIFV LAAQVLIFAP SIATMRLNWL KNHINKAAAA AVVIDGLQPP
ELPKDVQADT LLATGTKAIA LTKDGTTRLL AMADMPQEVD GQYDISDVGT LTAIKDAVDT
LLFGGNRLIS VSGPIGDTSM RVEVVMSDAP LHRGLLAYAT RIAVVSLIIS VITGLLLFVT
LNRMLINPIR RLSRNIQAFA SDPENPDRVM EVISGRDELA FVARHLATMQ EDLQKTLRQQ
KSLADLGLAV SKINHDMRNI LASAQLMSDR LVDVDDPMVK SFAPKLVRTI DRAVGYTSEV
LAYGQASEAE PRRRRFVLST LSQEVQDILA LDKGIDFVDQ ISPDIEIDAD SEQLFRVIHN
LCRNAAQALS SAMTEMTTAT PRILLSAHRI GSVVAITVDD NGPGLPRKAR ENLFTPFRGS
ARSGGTGLGL AIAREIVLAH GGTIALMEKP SSGTQFRIEI PDRPVALDTF RLRA
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