Gene Avi_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0448 
SymboliunH 
ID7388459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp381919 
End bp382863 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content59% 
IMG OID643650103 
Productinosine-uridine preferring nucleoside hydrolase 
Protein accessionYP_002548318 
Protein GI222147361 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC CCAGAAAAAT CATCATCGAT ACCGATCCCG GTCAGGACGA TGCCGCAGCC 
ATCATGCTGG CGCTTGCCAG TCCCGATCAG TTGGACGTCC TCGGCCTGAC GGTGGTTGCA
GGAAATGTTC CCCTGTCGAT GACCAGCCGC AATGCCCGTA TCGTCTGCGA ACTGTCGGGC
CGGCCCGACC TGCCGGTCTA TGAAGGTGCG TTAAAGCCTC TGGAGCGGCC CCAGGTGACG
GCGGAACATG TGCATGGCAA GACCGGGCTG GACGGGGCCG AGGTCGATGA GCCGGTCATG
CCGGTTCAAG ACCAGCATGC GGTCGATTTT ATTATCGACA CCATTCGCCG CGAACCAGCG
GGCACCATTA CGCTCTGCAC GCTCGGACCG CAGACCAATA TTGCCCTGGC CCTGCAAAAG
GCCCCGGATA TTGCACCGCG CATTCGCGAA CTTGTGATGA TGGGCGGTGG CTTTTTCGAG
GGTGGCAATA TTACCCCTGC GGCGGAGTTC AATGTCTATG TCGATCCGCA GGCATCCCGG
ATTGTGTTTG GTTCAGGCAT CCCGATCGTG ATGATGCCGC TGGACGTCAC CCACCAGCTT
TTGACCACCA AGGCCCGGGT TGCCCGCATT GGCGCCATCG GTACACGGGT GGCCAAGGTC
ATGGTGGACT GGCTGGAGTT TTTCGAGCGT TTCGATATCG AGAAATACGG TTCGGATGGT
GGACCGCTGC ATGATCCCAG CGTGATTGCC TATCTTCTCC AGCCGGAGCT GTTTTCCGGG
CGTGATTGCA ACGTGGAAAT CGAAACTGAA TCTGAACTGA CGGTCGGCAT GACGGTGGTG
GACTGGTGGC GCGTGACCGG TCGTACGCCC AATGCCAAGG TGATGCGCGA TGTCGATGCT
GACGGCTTCT TTGCCTTGCT GACGGAACGG TTGGCGCGCC TTTAA
 
Protein sequence
MEKPRKIIID TDPGQDDAAA IMLALASPDQ LDVLGLTVVA GNVPLSMTSR NARIVCELSG 
RPDLPVYEGA LKPLERPQVT AEHVHGKTGL DGAEVDEPVM PVQDQHAVDF IIDTIRREPA
GTITLCTLGP QTNIALALQK APDIAPRIRE LVMMGGGFFE GGNITPAAEF NVYVDPQASR
IVFGSGIPIV MMPLDVTHQL LTTKARVARI GAIGTRVAKV MVDWLEFFER FDIEKYGSDG
GPLHDPSVIA YLLQPELFSG RDCNVEIETE SELTVGMTVV DWWRVTGRTP NAKVMRDVDA
DGFFALLTER LARL