| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0432 |
|---|
| Symbol | |
|---|
| ID | 7388445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 369264 |
|---|
| End bp | 369953 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643650089 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548304 |
|---|
| Protein GI | 222147347 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0331052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTT TGGCAATCGA CACCGCCGGC GTTGATTGCG CTGTTGGCCT GTATGACAGC
GATCTTGACC GGATGCTGGC GGCCAGAAGC GAAACGATTG GCCGCGGTCA TGCCGAAAAG
CTGATGGGCA TGATCGACGC GGTCCTGAAC GAGGCGTCAC TTGCGCTTCC CAGTGTCGAG
CGGGTTGCTG TCACCATTGG TCCCGGTTCC TTTACCGGCA TTCGCGTCGG CCTGTCGGCG
GCGCGGGGGC TAGCTCTGGC GCTGGGTGTC GATATCGTCG GTATTTCAAC GCTTGCCGTT
CTGGCGGAGG CAGAGCGCAG GCGGGGTGGC GTGGTTGCGG TGCTTGCTGC GATGGATGCC
AAGCGCGATG AGGTCTATGT CCAGGGTTTC AGCCCTGATG CAGTGGCGCT GGATGACGCT
CGATTGCTGT CGGTGGACGA ATTTCGGGCG ATGGCGGCTG AGCTTGCCAG GCACGGCGCA
GTACGCGTCA CCGGTTCGGC ATGCTGGCTG CTGGAGAAAG ACGTGGCAGG GGAAAGTGAA
GAGGCTGCAA CAGTGGAGGC AGATCACTTT CCGATGGAGG ATATTGCCAG GCTTGGAGCG
GTTGCGCAGG CCTCGGGCAA GCCAAAACCG CTTTACTTGC GGGGGCCGGA TGTCAAGCCG
CAGGCAGGTT TTGCCGTGGC GCGGGCATGA
|
|---|
| Protein sequence | MILLAIDTAG VDCAVGLYDS DLDRMLAARS ETIGRGHAEK LMGMIDAVLN EASLALPSVE
RVAVTIGPGS FTGIRVGLSA ARGLALALGV DIVGISTLAV LAEAERRRGG VVAVLAAMDA
KRDEVYVQGF SPDAVALDDA RLLSVDEFRA MAAELARHGA VRVTGSACWL LEKDVAGESE
EAATVEADHF PMEDIARLGA VAQASGKPKP LYLRGPDVKP QAGFAVARA
|
|---|
| |