| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0394 |
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| Symbol | hemN |
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| ID | 7387835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 339620 |
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| End bp | 340801 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650061 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002548276 |
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| Protein GI | 222147319 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC CAACGTCGCT TCTCCTTCCA GACACCGGCG AACCGGGCTT TGGCATCTAT
ATTCACTGGC CGTTCTGCGC GGCCAAATGC CCCTATTGTG ACTTCAACAG CCATGTTCGT
CATCAGAAGA TCGATCAGCC CCGCTTCACG CAAGCCTTCC TGAAGGAAAT GGAGACGATG
CGGGCCATGA GCGGCCCCAA GACCGTCACC AGCATTTTCC TTGGCGGCGG TACGCCTTCG
CTGATGGACC CGGCCACGGT CGGCGCCATC CTGGAGGGAA TCGCCCGCTA TTGGACCGTG
CCACGCGGCA TCGAGATCAC CATGGAAGCC AATCCGACCA GTGTGGAAGC GGAACGGTTT
CGCGGCTATC GGTCGGCTGG CGTCAACCGT GTGTCGCTTG GCGTGCAGGC ACTCAATGAT
GCCGATCTGA AATTTCTGGG TCGGATGCAT TCGGTCGAGG ATGCCCTGAA AGCCGTCCGG
CTGGCACGCG AGATTTTCCC GCGCATGTCC TTCGACCTGA TCTATGCCCG CCCCAATCAG
ACGATTGCCG ATTGGGATGC CGAGCTGAAG CTGGCGATCT CCTATGCGGT CGACCATCTG
TCGCTCTATC AGCTGACCAT CGAAGAAGGC ACGCCGTTCT TCGGCCTGCA CAAGGCTGGC
AAGATCATTA CCCCGGATGA GGAACATGCT GCCCAGCTCT ATGAGGCGAC GCAGGAGATC
ACCGAGCGCG AAGGCCTGCC CGCCTATGAG GTTTCCAACC ATGCGCGGCC CGGCGCCGAG
AGCCGTCACA ACCTGACCTA TTGGCGCTAT GGCGATTATG CCGGTATTGG CCCTGGCGCC
CATGGACGGC TGACACGCGG CCATGAAAAA CTGGCGACCG CCACGGAAAA GCACCCGGAA
ACCTGGCTTT CGGCGGTCGA ACAGAACGGC CACGGCATGG TCATCCAGGA CGCACTGGGT
TCCGAAGAAC AGGCCGACGA ATTGCTGCTG ATGGGTCTCA GGCTACGCGA AGGCGTCGAT
CTCGCTCGCT GGCAGCAATT GTCCGGCCGC GATCCGGACC CGGTCCGCGA ACAATTTTTA
CTGGAACACG GATTTATCGA ACGTCTCGGC AATTCCCGGC TGCGCTGCAC CCCGAAGGGC
ATGCTGGTTC TGGATGCCGT CGTTGCGGAT CTCGCCTGCT GA
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| Protein sequence | MAEPTSLLLP DTGEPGFGIY IHWPFCAAKC PYCDFNSHVR HQKIDQPRFT QAFLKEMETM
RAMSGPKTVT SIFLGGGTPS LMDPATVGAI LEGIARYWTV PRGIEITMEA NPTSVEAERF
RGYRSAGVNR VSLGVQALND ADLKFLGRMH SVEDALKAVR LAREIFPRMS FDLIYARPNQ
TIADWDAELK LAISYAVDHL SLYQLTIEEG TPFFGLHKAG KIITPDEEHA AQLYEATQEI
TEREGLPAYE VSNHARPGAE SRHNLTYWRY GDYAGIGPGA HGRLTRGHEK LATATEKHPE
TWLSAVEQNG HGMVIQDALG SEEQADELLL MGLRLREGVD LARWQQLSGR DPDPVREQFL
LEHGFIERLG NSRLRCTPKG MLVLDAVVAD LAC
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