Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0393 |
Symbol | |
ID | 7387834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 338839 |
End bp | 339579 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650060 |
Product | methyltransferase protein |
Protein accession | YP_002548275 |
Protein GI | 222147318 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTAG ATGATGCCTT TGCACTGCAT GACATGGCCA TTTTCTATGA CAGCTTCAAC ATTCATGGAG AAGACGGGGA TTTTTACGAG ACGTATCCAA AAACGCCCTG CCGAATTCTC GATATCGGCT GCGGCACAGG CTCGGTGACG CTCCGGCTGG CAAGACGCGG CCATCAGGTG ACAGGGATCG ATCCCGCGCC GGGCATGTTG GCTATGGCAA AAGCCAAAGA CAAGGAAGGG TTAGTGCGCT GGATTGCCGC CAATGCCTTC GATCTCAATC TCGAGCGAGA GCAATTCGAT CTGATCATCA TGACCGGCCA TGTCTTTCAG GTCTTTCTCG ATGATGAAGA AACCCTTCTG GCGCTCACCA ATGCCCGTCG CCATCTCGCG CCGGGTGGAC AGATGATCAT CGAGAGTCGC AATCCATTGT TGCGCGCCTG GGAAGGGTGG ACCGAAGCCA AAACCCGCAA CACAGCGCAG GTGCCTAGTA TCGGCCCGGT CGAGGTTTTC TATCAGGTCG ACAGGACCGA AGGGGAGCAT GTCACCTTTG ACGCGACTTT CACGCTGCTT AAGACAGGTG AAAAGCGGAT CAGTCGCAGT TGCCTACGTT TCCCTGGTCG CGGCAAGGTC GAACAGCTGT TCAAGGCAGC CGGGTTCAAG AGCATCGAGA CGCTTGGCTG GTGGGATGGC CGCAGCTTTG ACCCGACCAG CCCGGAAATC ATTGCCATCG CCAGCGTCTG A
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Protein sequence | MPVDDAFALH DMAIFYDSFN IHGEDGDFYE TYPKTPCRIL DIGCGTGSVT LRLARRGHQV TGIDPAPGML AMAKAKDKEG LVRWIAANAF DLNLEREQFD LIIMTGHVFQ VFLDDEETLL ALTNARRHLA PGGQMIIESR NPLLRAWEGW TEAKTRNTAQ VPSIGPVEVF YQVDRTEGEH VTFDATFTLL KTGEKRISRS CLRFPGRGKV EQLFKAAGFK SIETLGWWDG RSFDPTSPEI IAIASV
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