Gene Avi_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0393 
Symbol 
ID7387834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp338839 
End bp339579 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content56% 
IMG OID643650060 
Productmethyltransferase protein 
Protein accessionYP_002548275 
Protein GI222147318 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTAG ATGATGCCTT TGCACTGCAT GACATGGCCA TTTTCTATGA CAGCTTCAAC 
ATTCATGGAG AAGACGGGGA TTTTTACGAG ACGTATCCAA AAACGCCCTG CCGAATTCTC
GATATCGGCT GCGGCACAGG CTCGGTGACG CTCCGGCTGG CAAGACGCGG CCATCAGGTG
ACAGGGATCG ATCCCGCGCC GGGCATGTTG GCTATGGCAA AAGCCAAAGA CAAGGAAGGG
TTAGTGCGCT GGATTGCCGC CAATGCCTTC GATCTCAATC TCGAGCGAGA GCAATTCGAT
CTGATCATCA TGACCGGCCA TGTCTTTCAG GTCTTTCTCG ATGATGAAGA AACCCTTCTG
GCGCTCACCA ATGCCCGTCG CCATCTCGCG CCGGGTGGAC AGATGATCAT CGAGAGTCGC
AATCCATTGT TGCGCGCCTG GGAAGGGTGG ACCGAAGCCA AAACCCGCAA CACAGCGCAG
GTGCCTAGTA TCGGCCCGGT CGAGGTTTTC TATCAGGTCG ACAGGACCGA AGGGGAGCAT
GTCACCTTTG ACGCGACTTT CACGCTGCTT AAGACAGGTG AAAAGCGGAT CAGTCGCAGT
TGCCTACGTT TCCCTGGTCG CGGCAAGGTC GAACAGCTGT TCAAGGCAGC CGGGTTCAAG
AGCATCGAGA CGCTTGGCTG GTGGGATGGC CGCAGCTTTG ACCCGACCAG CCCGGAAATC
ATTGCCATCG CCAGCGTCTG A
 
Protein sequence
MPVDDAFALH DMAIFYDSFN IHGEDGDFYE TYPKTPCRIL DIGCGTGSVT LRLARRGHQV 
TGIDPAPGML AMAKAKDKEG LVRWIAANAF DLNLEREQFD LIIMTGHVFQ VFLDDEETLL
ALTNARRHLA PGGQMIIESR NPLLRAWEGW TEAKTRNTAQ VPSIGPVEVF YQVDRTEGEH
VTFDATFTLL KTGEKRISRS CLRFPGRGKV EQLFKAAGFK SIETLGWWDG RSFDPTSPEI
IAIASV