| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0390 |
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| Symbol | rpsT |
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| ID | 7387831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 334931 |
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| End bp | 335197 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650057 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_002548272 |
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| Protein GI | 222147315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAATA CTACATCGGC GAAGAAGGCG ACCCGCAAGA TCGCTCGCCG CACCGCAATC
AACAAGAGCC GCCGTACGCG CGTTCGTAAC TTTGTTCGCA AGGTTGAAGA AGCCATCGCT
TCTGGCGATC AGGCACTGGC TGCAGCCGCA TTGAAGGCTG CCCAGCCTGA ACTGCACCGC
GCTGCTTCCA AGGGCGTTGT TCACGCCAAT ACCGCGTCGC GCAAGATTTC GCGTCTTGCC
AGCCGCGTCA AGGCGCTCGC CGCCTAA
|
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| Protein sequence | MANTTSAKKA TRKIARRTAI NKSRRTRVRN FVRKVEEAIA SGDQALAAAA LKAAQPELHR
AASKGVVHAN TASRKISRLA SRVKALAA
|
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