| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0386 |
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| Symbol | |
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| ID | 7387827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 329726 |
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| End bp | 331213 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650053 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548268 |
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| Protein GI | 222147311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5278] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0712602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAA CAAACGCAGG TTTCATCCGC TCCAGTCTGT TTGTGCTTGG CCTGGGCTGC
CTCCTCCTGG TCAGCCTGAT CGGCTCGACC CTGTGGCTGA CCGGCAAGAC TCGCGTCACC
TTCGGAACTG TTGTCGAGGA GCGGGTCATT CGACGCGCCA GCGCCGACCT GATGCAGACG
CTGACTGATG CTGAAACGGG GCAGAGAGGC TATCTGATTA CCCGTGATGT CGCTTTCCTG
ACACCATACA GCCAGGCCAT CGGCGATGTG ACCACGGAAA TGGACAGTCT CGTCCATCTG
CTGGAGCCGC GCCCTGAGCA TGCCCCGGAT GTCGAGAAGC TGCGCGAATT GGTAAAGGCC
AAGCTTGAAG AATTGGCCAG GACCGTCGAG CTGACCCGCA GCGGCGACAT CCGCCAGGCC
TACGAACTTG TCCGGGCCGG TTACGGCAAG CAGCTGATGG ACCAGATCCG CACCGTACTT
GACGAGGTCC GCGACGAATC CGACAACAGG ATAGACCAGG GAATTGCCAG TCAGCTGCTG
GCCATCGGCT GGTTGCAGGT CTTTACCATC GGCGGGGCCG TGGCCATCGT GATCGTGATC
GGCGGCGCGA TCCTGATCAT CATCCAGCAC GTGCGCGATC TGTTGAAGGC CCGCCAGGAG
GTGGAGGTCC TCAATGCGGG GCTGGAAGAA CGTGTGCAGG AGCGAACCGA AGACCTGATG
CAGGCCAACC AGGAAATCCA GCGCTTCGCC TATATCATCA CCCACGACCT GCGCGCACCC
CTCGTCAATA TCATGGGCTT TACCGCCGAA CTGGACAGCG CGCTCCAGAT ATTGAAGACC
TATGTTCTGG CGGATGGACA ACCCTTGACG CCGCAACAGA TTGAGGATGC GCGGCTTGCC
GCCTCCGAGG ACCTGCCGGA AGCGATTTCC TTCATCCGCT CCTCGACCCG CAAGATGGAC
GGGCTGATCA ACGCCATCCT GAAAATCTCA CGCGACGGAC GCCGCCAGCT CAAGCCGGAA
GAGCTGGATC TGAAGCCGCT GATCGAGACA ACGGCCGCCA GCGTCCACCA CCAGATCAGC
GAGAGCGGCG GGCATACCGA AATTTCAACC GACGTTGCCA GCATCATATC CGACAGGTTG
TCCCTGGAGC AAATTCTCGG TAACCTTTTT GACAACGCTA TCAAATATAA GTCCCCAGAT
CGCCCGGTCG TTCTTTCTAT CCGGGCGGTC TCGGATGGAC GGCACTTCAT TCGCCTGGAA
ATAGAGGATA ACGGCCGCGG CATCGCTGAG CAGGATCATG AACGGATTTT CGAGCTTTTC
CGCCGCTCGG GACAGCAGAA CCAGGTGGGT GAAGGCATTG GCCTTGCCCA TGTGCGCTCG
TTGACGCGCA ACCTGGGAGG TGAAATTACC GTACGCTCCA AGATCGGCGT CGGCTCGACA
TTTATTTTGC GCTTGCCGCG CGACCTTTCG AAATTGGTAG GGACCTGA
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| Protein sequence | MSATNAGFIR SSLFVLGLGC LLLVSLIGST LWLTGKTRVT FGTVVEERVI RRASADLMQT
LTDAETGQRG YLITRDVAFL TPYSQAIGDV TTEMDSLVHL LEPRPEHAPD VEKLRELVKA
KLEELARTVE LTRSGDIRQA YELVRAGYGK QLMDQIRTVL DEVRDESDNR IDQGIASQLL
AIGWLQVFTI GGAVAIVIVI GGAILIIIQH VRDLLKARQE VEVLNAGLEE RVQERTEDLM
QANQEIQRFA YIITHDLRAP LVNIMGFTAE LDSALQILKT YVLADGQPLT PQQIEDARLA
ASEDLPEAIS FIRSSTRKMD GLINAILKIS RDGRRQLKPE ELDLKPLIET TAASVHHQIS
ESGGHTEIST DVASIISDRL SLEQILGNLF DNAIKYKSPD RPVVLSIRAV SDGRHFIRLE
IEDNGRGIAE QDHERIFELF RRSGQQNQVG EGIGLAHVRS LTRNLGGEIT VRSKIGVGST
FILRLPRDLS KLVGT
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