| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0380 |
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| Symbol | |
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| ID | 7387821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 324790 |
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| End bp | 325719 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643650047 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548262 |
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| Protein GI | 222147305 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC TACGTCACCT CCGCTATGCC GTGACCGTCG CCGAAGAGGG CCATTTGACC
CGTGCGGCGG AGCGACTTGG CCTGCAACAG CCACCTCTCA GCCAGCAGAT CAAGGCTCTG
GAAACAGAGG TCGGGGTGAC GCTGTTTATC CGCCAGCCCC GCGGCATGGC GCTGACCGAG
GCGGGGGTGG CGTTTATCGC CCGCGCCCGA CAGATCCTTG CCGATGTGGA TATGGCCGTT
GAGGCCGCAC AACGGGCGGC GCGCGGCGAA ATCGGCGAGC TTGCCATCGG CTTTACCACC
TCGGCAGTCT TTCATCCGCT GGTGCCTAGC ATCGTGCGGG CCATGCGGCT CTCCTCGCCG
TCGCTGAAAC TGCGGTTGGA CGAAGGCTCT ACGACGGAAC TTCTGTGTGA ATTGTCCGCC
GGCAGGCTTG ATGCGGCCTT CATCCGCGCC ACCGCAGGTG CTTTGCCCGG ATCGGGGCCA
ACGCTCAGCA TCGAGACCGT CGATATCGAA GACATGGTAC TGGCTCTGCC CGACACCCAT
CCTTTGGCCC TGCACAGCCA AAACGGCGAC AGGGATACCG TCGCGCTTGC CGCGCTGGCC
GGAGAAACTT TTGTTCTCTA TCGCCGCCCC CTGGCGCAAG GGCTGTATGA CCGGATCATC
GCCGCCTGCC AGGCCGCCGG CTTCAGTCCG AATGTCGCAC AGGAGGCACC GAAACTGGTC
TCCACCCTCA GCCTGGTGGC GGCGGGCCTT GGCCTGTCGA TCATTCCGCA GTCCATGGCA
CGGCTGGAAA CCTCCGGCGT CGCCTATCGT CGTTTTGCGC CCGGCTCCGG CCTCGATGCA
CCGCTTTCGC TTGCCTATCG CCGCGATTCC TATCGTGGTG CGCTGAAGAC CTTCGTTGAG
GAAGTGAGGC GGCAAGTCAG CACACCGTGA
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| Protein sequence | MIELRHLRYA VTVAEEGHLT RAAERLGLQQ PPLSQQIKAL ETEVGVTLFI RQPRGMALTE
AGVAFIARAR QILADVDMAV EAAQRAARGE IGELAIGFTT SAVFHPLVPS IVRAMRLSSP
SLKLRLDEGS TTELLCELSA GRLDAAFIRA TAGALPGSGP TLSIETVDIE DMVLALPDTH
PLALHSQNGD RDTVALAALA GETFVLYRRP LAQGLYDRII AACQAAGFSP NVAQEAPKLV
STLSLVAAGL GLSIIPQSMA RLETSGVAYR RFAPGSGLDA PLSLAYRRDS YRGALKTFVE
EVRRQVSTP
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