| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0375 |
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| Symbol | |
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| ID | 7387818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 321955 |
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| End bp | 322530 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650044 |
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| Product | tyrosine/serine protein phosphatase |
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| Protein accession | YP_002548259 |
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| Protein GI | 222147302 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
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| TIGRFAM ID | [TIGR01244] conserved hypothetical protein TIGR01244 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.282205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCATCC TGCTGGCGAA AGCCACCCGC TATACCGCCC TTGCCTGCCT GACCGGTCTG
CTGTCCTGTG GCGCTTACCT TGGCTATCTC CGCCTGACAG GCAATTTCCA CGAGGTCATT
CCTGGTGAAT TCTATCGCTC CGCCCAACCG AGTGCCGCCG ATATCAAGGA CTATGCCGGG
CGCTACGGTA TCAAGACCAT CGTCAATCTG CGCGGCCCCT CCCCTTCCCC CTGGTATGCG
CAGGAAGTCG CAACCGCCCG GGAACTTGGC ATCGGCCACA TCGATTTTCG CATGTCGGCT
GGCAAGGGCC TGACCATCGA CAAGGCCGAG CAACTGGTTG CTCTGCTGAA ATCCGCACCA
AAGCCCATCC TTATCCATTG CGAGGGCGGT GCAGACCGCA GCGGTCTCGC CTCCGTGCTC
TACCTGCAAC AGATCGCCGG CGTGCAGGAG GACACAGCAG AGCAACAACT CTGGCCGGTG
ATCTATGGCC ATGTTGGCAT CCCCTATGTC ACCAAGGCCT ATGCCATGGA CCGCAGTTGG
CTGGATTTTG AAAAGGCCAT GGGGATCGAA AGCTGA
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| Protein sequence | MSILLAKATR YTALACLTGL LSCGAYLGYL RLTGNFHEVI PGEFYRSAQP SAADIKDYAG
RYGIKTIVNL RGPSPSPWYA QEVATARELG IGHIDFRMSA GKGLTIDKAE QLVALLKSAP
KPILIHCEGG ADRSGLASVL YLQQIAGVQE DTAEQQLWPV IYGHVGIPYV TKAYAMDRSW
LDFEKAMGIE S
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