Gene Avi_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0360 
Symbol 
ID7387805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp308709 
End bp309200 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID643650031 
Producthypothetical protein 
Protein accessionYP_002548246 
Protein GI222147289 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTCA AGCTTTTGTT TGCAGCCATG GCCGGGGCCG CCATGGCTTT GCCACGGTTT 
AGAGCGGAAG ACACGCCACC GCTGGTGGCC GCCAATGCCG ATCATTTGAG CCTGCAACCA 
GCGCCAATCA ATCCGGATTG GATTCTTGAG GGCGATCCGC AGGCCCGGCT GGCCAATCAC 
TCACAAAGTC CTGATGAAGC AAGTTCGACA GCTGTCTGGG ATTGTACCGC CGGTAGTTTC 
CGCTGGTATT TCGGCTGGGA CGAGACCGTG GTGATCCAGG AGGGCGAAGT GCATGTGACC 
GCGCAGGATG GCACCGAACG GTTGCTGAAG ACCGGTGACA TCGCCTATTT CAAGGGTGGG 
ACCTGGGCCA CCTGGCGCAT CGAGACCTAT GTGCGCAAGA TCGCATTTCT GCGTAAACCT 
TTTCCGGAGC CAATCGCGAC GCTTTACCGG CTTCGAAATG CCCTGCGGAG CGGATCACGC 
GCGCCGATTT GA
 
Protein sequence
MPVKLLFAAM AGAAMALPRF RAEDTPPLVA ANADHLSLQP APINPDWILE GDPQARLANH 
SQSPDEASST AVWDCTAGSF RWYFGWDETV VIQEGEVHVT AQDGTERLLK TGDIAYFKGG 
TWATWRIETY VRKIAFLRKP FPEPIATLYR LRNALRSGSR API