| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0357 |
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| Symbol | ugpE |
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| ID | 7387803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 306597 |
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| End bp | 307439 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650029 |
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| Product | ABC transporter membrane spanning protein (sn-Glycerol-3-phosphate) |
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| Protein accession | YP_002548244 |
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| Protein GI | 222147287 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA CCAAACTCTT CGACCATGTG ATCTTGCTGC TCGGTGTTCT TGTGATGCTT
GGCCCGCTGG TTGTGGCCTT CACCACCTCA TCGCATACGG CAGCCGAAAT CCACCAAAAG
GGCCTGATGC TCTCCATGGG CGGACATCTT GGCGAGACCT ATAACAAGGT GCTGTTTGCC
CAGACCGGCT TTAACGGCAA GGTCACGGGT CTCAGCATGC TGCTCAATTC GCTGATCCTC
GGCCTTGGCT TTGCCATCGG CAAAATCGTG CTGTCGATGA TGGCAGCCTA TGCGATTGTC
TATTTCCGCT TCCGCTTTGC CACGCTGGCC TTCTGGATCA TCTTCACCAC GCTGCTGTTG
CCGCTGGAAG TGCGCATCAT GCCGTCCTAC AAGGTGGCGA GTGATCTGGG GCTTTTGAAT
TCCTATACCG GCCTGATCCT GCCGCTGCTG GCGTCTGCCA CCGGCACTTT CTTTTTCCGG
CAATTCTTTA AATCCGTGCC GGAAGAGCTG TTGGAAGCGG CCCGTATCGA CGGTGCCGGT
CCATTCAAGT TCCTGATTGA TATTTTGATC CCGCTGTCGC GCACGATGAT TGCGGCGGTG
TTCATCATCA TGTTCGTCTA TGGTTGGAAC CAGTATCTCT GGCCCATGCT GATGACCACG
GATGAGAGCT TTTACACACT GATGCGCGGT ATCAAGCAGA TCCTTCAGGT CTGGGTGGGT
GCGCAAATTC CCGATTATAA CGAAGCCTTT GCCATGGCCG TGCTCGCTAT TCTGCCCCCT
GTCATCATCG TGGTGGTATT CCAGAGCTGG TTCATCAAGG GCCTCACCGA AACCGACAAG
TAA
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| Protein sequence | MYKTKLFDHV ILLLGVLVML GPLVVAFTTS SHTAAEIHQK GLMLSMGGHL GETYNKVLFA
QTGFNGKVTG LSMLLNSLIL GLGFAIGKIV LSMMAAYAIV YFRFRFATLA FWIIFTTLLL
PLEVRIMPSY KVASDLGLLN SYTGLILPLL ASATGTFFFR QFFKSVPEEL LEAARIDGAG
PFKFLIDILI PLSRTMIAAV FIIMFVYGWN QYLWPMLMTT DESFYTLMRG IKQILQVWVG
AQIPDYNEAF AMAVLAILPP VIIVVVFQSW FIKGLTETDK
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