| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0356 |
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| Symbol | ugpA |
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| ID | 7387802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 305705 |
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| End bp | 306586 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650028 |
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| Product | ABC transporter membrane spanning protein (sn-Glycerol-3-phosphate) |
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| Protein accession | YP_002548243 |
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| Protein GI | 222147286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.584093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG TTCAGTTCAA CTCGCGATTT CTGCCTTATG TCTTTTTGGC TCCGCAATTG
TGCATTGTGG CGATCTTCTT CTATTGGCCG GCGGTGCAGG CCATCCAGTC GTCCTTCTAT
ATTGAGGACC CGTTCGGCTT TGGCTCAACC TTCGTGGGGC TGGCCAATTA TGTCGATATG
TTCAGCTCGT CTGAATATCG TAAGATCGCG CTGTTTACGC TGTGCTTCAG CGTGGTGGTG
ACGTTTTTGG TGCTGTCCAT CGGAACCGTG CTCGCCGTCA AGGCTGATGC CGTGATCCGC
GGACAATCGG CCTACAAGAC CCTGCTGATC GTTGTCTACG CCATCGCGCC GCCTGTGGCT
GGCCTGATCG GCATGATGTT CTTTGATCAA CACATTGGTC CCTTCGTGAA ATTCGTCGCC
CTGTTTGGCT GGGACATGAA GGTGGGTCTG AACTATTTTG ACACCGCCTT TGCCATGGTG
ACAATCGCGG TCTGGAACCA GATTCCCTAC AATTTCATCT TCATTCTCTC AGGCCTTCAG
GGCATTCCGG CCTCGGTGCG CGAAGCCGCC ACGCTGGATT GCCGCTCCGG CACCCGCCGG
TTCTGGACCG TGACCATGCC GCTTTTGACG CCGACCGCGT TTTTCCTGCT GGTGGTCAAC
ATGACCTATT CGCTGTTCGA TACGTTTGGT GTGATCGACG TGATCGTCAA GGATAAGCCC
GCCGATAACC CGATCACCTT GGTTTACAAG GTTTATACCG ATGGCTTCCG GGGCAATGAC
ATCGGCTCTT CTTCCGCGCA GTCGGTGATC CTGATGGTCG TCGTGCTGGT TTTGACAATG
ATCCAGTTCC GCTTCATCGA GCGGCGCGTC CATTACGGTT GA
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| Protein sequence | MKRVQFNSRF LPYVFLAPQL CIVAIFFYWP AVQAIQSSFY IEDPFGFGST FVGLANYVDM
FSSSEYRKIA LFTLCFSVVV TFLVLSIGTV LAVKADAVIR GQSAYKTLLI VVYAIAPPVA
GLIGMMFFDQ HIGPFVKFVA LFGWDMKVGL NYFDTAFAMV TIAVWNQIPY NFIFILSGLQ
GIPASVREAA TLDCRSGTRR FWTVTMPLLT PTAFFLLVVN MTYSLFDTFG VIDVIVKDKP
ADNPITLVYK VYTDGFRGND IGSSSAQSVI LMVVVLVLTM IQFRFIERRV HYG
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