Gene Avi_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0348 
Symbol 
ID7387796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp300025 
End bp300612 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID643650022 
Producthypothetical protein 
Protein accessionYP_002548237 
Protein GI222147280 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.236028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCCG TCTACATCAC CCATCCGCAG GTCCGGATCG ACCCGGAGGT GCCGGTACCG 
CAATGGGGAC TGTCCGACCT GGGGCAGGAG CGGACCCGCC GGACGGCGAC AGCCGCTTGG 
GTGCGCCAGC TTGGCCGTAT CGTCAGCAGC GCCGAGACCA AGGCAGTAGA AACAGCGGCG 
ATCCTGGCGG GTGCAGCCAA TATTGGTGTC GAACAGATCG AGACCATGCA TGAAAACGAC 
CGTTCCGCGA CCGGATTTCT GACCCCATCG GAGTTTGAAA AGGCGGCGGA CTGGTTCTTT 
GCCCATCCTG AAGACAGTTT TTGCGGCTGG GAGCGGGCCA TTGATGCGCA AGCCCGGATT 
GTCGGGGCGA TCCAGGATGT TCTTGGCCAG CACGATCCGA CGGTTCCCAT CGCTTTCATC 
GGTCATGGCG GCGTCGGAAC CCTGCTGAAA TGCCACCTGC AAGGCCAGCC GATCCACCGA 
AGCGGCGATC AGCCACCGGG TGGCGGCAAT CTCTTCTGCT TCACTCTTGC GGATCTGACC 
GTCACATGCG ACTGGACCGC CATGGAAATC TGGCAGGGAG ATCGTTGA
 
Protein sequence
MFAVYITHPQ VRIDPEVPVP QWGLSDLGQE RTRRTATAAW VRQLGRIVSS AETKAVETAA 
ILAGAANIGV EQIETMHEND RSATGFLTPS EFEKAADWFF AHPEDSFCGW ERAIDAQARI 
VGAIQDVLGQ HDPTVPIAFI GHGGVGTLLK CHLQGQPIHR SGDQPPGGGN LFCFTLADLT 
VTCDWTAMEI WQGDR