| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0342 |
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| Symbol | bacA |
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| ID | 7387791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 294962 |
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| End bp | 295768 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650017 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_002548232 |
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| Protein GI | 222147275 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.359118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATC AATCGATCGT CAGCGCCCTT CTTCTCGGTC TTATCGAGGG TCTAACGGAA
TTCATCCCGG TGTCTTCGAC GGCGCATGTG CTGTTGGCCG GTCATTTTCT CGGCTTCAAA
TCGCCCGGAA ACACCTTTGC AGTGCTGATT CAGCTCGGTG CCATTCTTGC TATTTTGGCT
GTCTATATCC AGAAATTGCT GGGGATTGCG CTGTCTTTGC CCAGCAATCC TAAAAGCCGC
CATTTCGTCC TGGCTGTGCT GGTGGCTTTC CTGCCCGCCG CCATCATTGG CGCGCTGGCC
CACGACTTCA TCAAGGCCGT GCTGTTTGAA ACCCCGATGC TGATCTGCGT GATGCTGATC
CTGGGCGGGG TGATTCTTCT GTGGGTTGAT CGGATGACGT TCAAGCCCCG CTATACCGAC
GTGATGGATT ATCCGCTGTC ACTGGCTCTG AAGATCGGCC TGTTCCAGTG CCTGGCGATG
ATTCCCGGCA CATCACGGTC GGGCGCAACC ATTGTCGGCT CGCTGCTGAT GGGCACAGAT
AAGCGTTCGG CCGCCGAATT TTCGTTTTTC CTGGCGATGC CGACCATGTT GGGGGCCTTC
GTGCTGGATC TCTACAAGAA CCGCAATGCG CTCAGCATGG ATGACGGCCT GCTGATCGGC
GTCGGCTTCC TTGCGGCGTT CATTTCGGCG CTGTTCGTGG TGCGTGGACT GCTCGATTTC
GTCTCCCGCC GCGGCTATGC ACCCTTTGCC TGGTGGCGGA TAGCCGTCGG CGTCGTGGGC
CTGATCGGCC TTCTGGTCTG GGGATAA
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| Protein sequence | MEDQSIVSAL LLGLIEGLTE FIPVSSTAHV LLAGHFLGFK SPGNTFAVLI QLGAILAILA
VYIQKLLGIA LSLPSNPKSR HFVLAVLVAF LPAAIIGALA HDFIKAVLFE TPMLICVMLI
LGGVILLWVD RMTFKPRYTD VMDYPLSLAL KIGLFQCLAM IPGTSRSGAT IVGSLLMGTD
KRSAAEFSFF LAMPTMLGAF VLDLYKNRNA LSMDDGLLIG VGFLAAFISA LFVVRGLLDF
VSRRGYAPFA WWRIAVGVVG LIGLLVWG
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