Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0339 |
Symbol | |
ID | 7387788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 292043 |
End bp | 292939 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643650014 |
Product | hypothetical protein |
Protein accession | YP_002548229 |
Protein GI | 222147272 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCA GCCGGAGTGA CCCCATGAGA CTGATGATTT TTGGCGCCGG ATATTCCGGC AAGGCAATTG GCCAGCATTT TATCCAGCAG GGCATTCCCG TCAGTGGCAC GACGCGCTCA CCGGCCAAGG CCAAGGCTTT GAGCGATCTC GGCATCGAAC CGCTGGTTTT CGACGGCCAA CGTCTTTCAG ACGAGATCAT CCAGGCCATG GCCTGCGCCA CCCATGTCGT CCAGTCGATT GCTCCTGGCA GCGACGGCGA CCCGCTGCTG CGGTTGACGC AGGGCGCGCT GAAGACATGG ATGCCTAAAG TGCAATGGCT GGCCTATCTA TCGACCGTCG GCGTCTATGG CGACCACCAG GGCGCTTGGG TAGATGAAGA CACGGTCTGC AAACCTGTCT CGGTGCGCTC CAAAGAGCGG GTGGAAGCCG AACAGGCCTG GGGAAGAGCC GCGCTTGCGG CAGGTGTGCC GCTCTCGACA CTGCGGCTGT CAGGCATTTA CGGGCCGGGT CGCAATGGTC TTGTCAACAT GGCCGAAGGC ACGGCCCGGC GTCTGGTGAA AAAGGATCAG GTGTTCAACC GGATCCGCGT CGAAGATATT GCCGCCGCGA CCTGGTTTCT GGCCGGGCGA AACGAACAGG GGATCTTCAA TATCACCGAC CACGAACCCG CCCCGCCACA GGATGTGGTG GCAGAGGCTG CCCGGCTGAT GGAGGTCGAG CCGCCGCCGG AACAGGCCTT CGAGACAGCC GAGCTGTCGC CGATGGCGCG GTCCTTTTAC GGTGAGAATA AGCGGGTAAT GAATGCCAAG GTCCGGGCAC TGGGCTTTGC CTTTGCCTAT CCCGACTACC GGGTTTCTCT CAGCCAACTC TGGTCTTCAG GCCGCTGGCG GGGGTAG
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Protein sequence | MDSSRSDPMR LMIFGAGYSG KAIGQHFIQQ GIPVSGTTRS PAKAKALSDL GIEPLVFDGQ RLSDEIIQAM ACATHVVQSI APGSDGDPLL RLTQGALKTW MPKVQWLAYL STVGVYGDHQ GAWVDEDTVC KPVSVRSKER VEAEQAWGRA ALAAGVPLST LRLSGIYGPG RNGLVNMAEG TARRLVKKDQ VFNRIRVEDI AAATWFLAGR NEQGIFNITD HEPAPPQDVV AEAARLMEVE PPPEQAFETA ELSPMARSFY GENKRVMNAK VRALGFAFAY PDYRVSLSQL WSSGRWRG
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