Gene Avi_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0339 
Symbol 
ID7387788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp292043 
End bp292939 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID643650014 
Producthypothetical protein 
Protein accessionYP_002548229 
Protein GI222147272 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA GCCGGAGTGA CCCCATGAGA CTGATGATTT TTGGCGCCGG ATATTCCGGC 
AAGGCAATTG GCCAGCATTT TATCCAGCAG GGCATTCCCG TCAGTGGCAC GACGCGCTCA
CCGGCCAAGG CCAAGGCTTT GAGCGATCTC GGCATCGAAC CGCTGGTTTT CGACGGCCAA
CGTCTTTCAG ACGAGATCAT CCAGGCCATG GCCTGCGCCA CCCATGTCGT CCAGTCGATT
GCTCCTGGCA GCGACGGCGA CCCGCTGCTG CGGTTGACGC AGGGCGCGCT GAAGACATGG
ATGCCTAAAG TGCAATGGCT GGCCTATCTA TCGACCGTCG GCGTCTATGG CGACCACCAG
GGCGCTTGGG TAGATGAAGA CACGGTCTGC AAACCTGTCT CGGTGCGCTC CAAAGAGCGG
GTGGAAGCCG AACAGGCCTG GGGAAGAGCC GCGCTTGCGG CAGGTGTGCC GCTCTCGACA
CTGCGGCTGT CAGGCATTTA CGGGCCGGGT CGCAATGGTC TTGTCAACAT GGCCGAAGGC
ACGGCCCGGC GTCTGGTGAA AAAGGATCAG GTGTTCAACC GGATCCGCGT CGAAGATATT
GCCGCCGCGA CCTGGTTTCT GGCCGGGCGA AACGAACAGG GGATCTTCAA TATCACCGAC
CACGAACCCG CCCCGCCACA GGATGTGGTG GCAGAGGCTG CCCGGCTGAT GGAGGTCGAG
CCGCCGCCGG AACAGGCCTT CGAGACAGCC GAGCTGTCGC CGATGGCGCG GTCCTTTTAC
GGTGAGAATA AGCGGGTAAT GAATGCCAAG GTCCGGGCAC TGGGCTTTGC CTTTGCCTAT
CCCGACTACC GGGTTTCTCT CAGCCAACTC TGGTCTTCAG GCCGCTGGCG GGGGTAG
 
Protein sequence
MDSSRSDPMR LMIFGAGYSG KAIGQHFIQQ GIPVSGTTRS PAKAKALSDL GIEPLVFDGQ 
RLSDEIIQAM ACATHVVQSI APGSDGDPLL RLTQGALKTW MPKVQWLAYL STVGVYGDHQ
GAWVDEDTVC KPVSVRSKER VEAEQAWGRA ALAAGVPLST LRLSGIYGPG RNGLVNMAEG
TARRLVKKDQ VFNRIRVEDI AAATWFLAGR NEQGIFNITD HEPAPPQDVV AEAARLMEVE
PPPEQAFETA ELSPMARSFY GENKRVMNAK VRALGFAFAY PDYRVSLSQL WSSGRWRG